Variant report
| Variant | rs10899852 |
|---|---|
| Chromosome Location | chr10:44153867-44153868 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000169740 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs10430723 | 0.83[ASN][1000 genomes] |
| rs10736820 | 0.93[ASN][1000 genomes] |
| rs10736822 | 0.93[ASN][1000 genomes] |
| rs10751326 | 0.92[ASN][1000 genomes] |
| rs10751329 | 0.93[ASN][1000 genomes] |
| rs10793455 | 0.82[ASN][1000 genomes] |
| rs10793456 | 0.82[ASN][1000 genomes] |
| rs10793458 | 0.86[ASN][1000 genomes] |
| rs10793460 | 0.93[ASN][1000 genomes] |
| rs10793464 | 0.93[ASN][1000 genomes] |
| rs10793466 | 0.99[ASN][1000 genomes] |
| rs10793467 | 0.97[ASN][1000 genomes] |
| rs10899840 | 0.81[ASN][1000 genomes] |
| rs10899841 | 0.81[ASN][1000 genomes] |
| rs10899846 | 0.85[ASN][1000 genomes] |
| rs10899851 | 0.97[ASN][1000 genomes] |
| rs10899853 | 0.99[ASN][1000 genomes] |
| rs10899854 | 0.96[ASN][1000 genomes] |
| rs10899855 | 0.83[ASN][1000 genomes] |
| rs11238601 | 0.85[ASN][1000 genomes] |
| rs11238617 | 0.93[ASN][1000 genomes] |
| rs3123673 | 0.83[ASN][1000 genomes] |
| rs3814561 | 0.92[ASN][1000 genomes] |
| rs3814563 | 0.93[ASN][1000 genomes] |
| rs4078412 | 0.86[ASN][1000 genomes] |
| rs4326744 | 0.97[ASN][1000 genomes] |
| rs4347333 | 0.91[ASN][1000 genomes] |
| rs4415708 | 0.87[ASN][1000 genomes] |
| rs4431980 | 0.97[ASN][1000 genomes] |
| rs4537714 | 0.86[ASN][1000 genomes] |
| rs61859201 | 0.93[ASN][1000 genomes] |
| rs8181305 | 0.86[ASN][1000 genomes] |
| rs872532 | 0.97[ASN][1000 genomes] |
| rs962557 | 0.97[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:44153600-44154200 | Enhancers | Fetal Stomach | stomach |
| 2 | chr10:44153800-44154200 | Enhancers | Lung | lung |
