Variant report

Variant	rs10793466
Chromosome Location	chr10:44153857-44153858
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:44151901..44153868-chr10:44162528..44164728,2	K562	blood:
2	chr10:44144149..44146080-chr10:44152629..44154994,2	K562	blood:
3	chr10:44144089..44145856-chr10:44153637..44156105,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000169740	Chromatin interaction

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10430723	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10736820	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10736821	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10736822	0.96[CEU][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10751324	0.87[CEU][hapmap]
rs10751325	0.84[CEU][hapmap]
rs10751326	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10751327	0.84[CEU][hapmap];0.89[EUR][1000 genomes]
rs10751328	0.84[CEU][hapmap];0.86[EUR][1000 genomes]
rs10751329	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10751330	0.84[EUR][1000 genomes]
rs10751331	0.86[EUR][1000 genomes]
rs10793452	0.88[CEU][hapmap];0.81[AMR][1000 genomes]
rs10793453	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10793454	0.96[CEU][hapmap];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10793455	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10793456	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10793457	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10793458	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10793459	0.88[CEU][hapmap];0.80[EUR][1000 genomes]
rs10793460	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793461	0.89[EUR][1000 genomes]
rs10793463	0.86[EUR][1000 genomes]
rs10793464	0.96[CEU][hapmap];0.82[YRI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10793467	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899840	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10899841	0.96[CEU][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10899842	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10899844	0.84[CEU][hapmap]
rs10899845	0.85[CEU][hapmap];0.80[EUR][1000 genomes]
rs10899846	0.85[CEU][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10899848	0.84[CEU][hapmap];0.84[EUR][1000 genomes]
rs10899849	0.89[EUR][1000 genomes]
rs10899850	0.90[EUR][1000 genomes]
rs10899851	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899852	0.99[ASN][1000 genomes]
rs10899853	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899854	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899855	0.83[ASN][1000 genomes]
rs11238601	0.96[CEU][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11238602	0.84[CEU][hapmap];0.82[YRI][hapmap];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11238609	0.84[CEU][hapmap];0.87[EUR][1000 genomes]
rs11238617	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12248526	0.90[EUR][1000 genomes]
rs12254814	0.84[EUR][1000 genomes]
rs3123673	0.83[ASN][1000 genomes]
rs3123674	0.80[ASN][1000 genomes]
rs3814561	0.96[CEU][hapmap];0.82[YRI][hapmap];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3814563	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4078412	0.96[CEU][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4326744	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4347333	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4415708	0.96[CEU][hapmap];0.84[YRI][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4431980	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4537714	0.96[CEU][hapmap];0.82[YRI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61859187	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61859201	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8181305	0.96[CEU][hapmap];0.84[YRI][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs872532	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs962557	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44153600-44154200	Enhancers	Fetal Stomach	stomach
2	chr10:44153800-44154200	Enhancers	Lung	lung

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