Variant report

Variant	rs8181305
Chromosome Location	chr10:44119035-44119036
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:44111828..44115534-chr10:44118358..44120756,4	K562	blood:
2	chr10:43891050..43892878-chr10:44118624..44120563,2	K562	blood:
3	chr10:44115730..44119631-chr10:44140992..44144540,5	K562	blood:

Variant related genes	Relation type
ENSG00000169813	Chromatin interaction
ENSG00000230565	Chromatin interaction
ENSG00000169740	Chromatin interaction

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10430722	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10430723	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10736820	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10736821	0.84[EUR][1000 genomes]
rs10736822	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10751324	0.92[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap];0.81[AMR][1000 genomes]
rs10751325	0.88[CEU][hapmap];0.92[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10751326	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10751327	0.88[CEU][hapmap];0.80[EUR][1000 genomes]
rs10751328	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs10751329	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10751330	0.82[EUR][1000 genomes]
rs10751331	0.81[EUR][1000 genomes]
rs10793452	0.92[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap];0.89[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs10793453	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10793454	1.00[CEU][hapmap];0.82[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10793455	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10793456	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10793457	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793458	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10793459	0.92[CEU][hapmap];0.90[EUR][1000 genomes]
rs10793460	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10793461	0.80[EUR][1000 genomes]
rs10793463	0.84[EUR][1000 genomes]
rs10793464	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10793466	0.96[CEU][hapmap];0.84[YRI][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10793467	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10899840	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10899841	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10899842	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10899843	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10899844	0.88[CEU][hapmap];0.88[YRI][hapmap];0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10899845	0.89[CEU][hapmap];0.89[YRI][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10899846	0.90[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899848	0.89[CEU][hapmap];0.82[EUR][1000 genomes]
rs10899850	0.80[EUR][1000 genomes]
rs10899851	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10899852	0.86[ASN][1000 genomes]
rs10899853	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10899854	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11238601	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11238602	0.88[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11238609	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs11238617	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12248526	0.80[EUR][1000 genomes]
rs12254814	0.84[EUR][1000 genomes]
rs3123673	0.82[ASN][1000 genomes]
rs3123674	0.83[CHB][hapmap];0.81[ASN][1000 genomes]
rs3814561	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3814563	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4078412	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4326744	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4347333	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4415708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4431980	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4537714	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61859187	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61859201	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs872532	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs962557	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44118000-44119400	Active TSS	Liver	Liver
2	chr10:44118400-44119200	Active TSS	Duodenum Smooth Muscle	Duodenum
3	chr10:44118400-44119200	Active TSS	Ovary	ovary
4	chr10:44118400-44119400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:44118400-44119400	Active TSS	Brain Hippocampus Middle	brain
6	chr10:44118600-44119200	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr10:44118600-44119200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr10:44118600-44119200	Active TSS	Primary T cells fromperipheralblood	blood
9	chr10:44118600-44119200	Active TSS	Primary T regulatory cells fromperipheralblood	blood
10	chr10:44118600-44119200	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:44118600-44119200	Active TSS	Adipose Nuclei	Adipose
12	chr10:44118600-44119200	Active TSS	Aorta	Aorta
13	chr10:44118600-44119200	Active TSS	Brain Angular Gyrus	brain
14	chr10:44118600-44119200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
15	chr10:44118600-44119200	Active TSS	Right Atrium	heart
16	chr10:44118600-44119200	Active TSS	A549	lung
17	chr10:44118600-44119400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr10:44118600-44119400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr10:44118600-44119400	Active TSS	Brain Anterior Caudate	brain
20	chr10:44118600-44119400	Active TSS	Brain Cingulate Gyrus	brain
21	chr10:44118800-44119200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr10:44118800-44119200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr10:44118800-44119200	Enhancers	Primary neutrophils fromperipheralblood	blood
24	chr10:44118800-44119200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
25	chr10:44118800-44119200	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
26	chr10:44118800-44119200	Active TSS	Primary T killer naive cells fromperipheralblood	blood
27	chr10:44118800-44119200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr10:44118800-44119200	Active TSS	Muscle Satellite Cultured Cells	--
29	chr10:44118800-44119200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr10:44118800-44119200	Active TSS	Fetal Kidney	kidney
31	chr10:44118800-44119200	Active TSS	Pancreatic Islets	Pancreatic Islet
32	chr10:44118800-44119200	Active TSS	Rectal Mucosa Donor 29	rectum
33	chr10:44118800-44119200	Active TSS	Skeletal Muscle Female	skeletal muscle
34	chr10:44118800-44119200	Active TSS	Stomach Smooth Muscle	stomach
35	chr10:44118800-44119200	Active TSS	Thymus	Thymus
36	chr10:44118800-44119200	Active TSS	Hela-S3	cervix
37	chr10:44118800-44119200	Active TSS	NH-A	brain
38	chr10:44118800-44119200	Active TSS	NHLF	lung
39	chr10:44118800-44119200	Active TSS	Osteobl	bone
40	chr10:44118800-44119400	Active TSS	HUVEC	blood vessel
41	chr10:44118800-44119600	Active TSS	Brain Substantia Nigra	brain
42	chr10:44119000-44119200	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr10:44119000-44119200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
44	chr10:44119000-44119200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
45	chr10:44119000-44119200	Active TSS	Primary T helper cells fromperipheralblood	blood
46	chr10:44119000-44119200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
47	chr10:44119000-44119200	Flanking Active TSS	Duodenum Mucosa	Duodenum
48	chr10:44119000-44119200	Enhancers	Pancreas	Pancrea
49	chr10:44119000-44119200	Active TSS	K562	blood
50	chr10:44119000-44119200	Active TSS	Monocytes-CD14+_RO01746	blood

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