Variant report

Variant	rs10899936
Chromosome Location	chr10:44376051-44376052
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10899926	0.90[ASN][1000 genomes]
rs10899930	0.90[ASN][1000 genomes]
rs10899931	0.90[ASN][1000 genomes]
rs10899935	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899938	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10899939	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10899940	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899941	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899942	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899943	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10899949	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs11238745	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11238747	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11238765	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12242985	0.90[ASN][1000 genomes]
rs12248836	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1325486	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1325490	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13313099	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1460540	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1675291	1.00[CHB][hapmap];0.84[JPT][hapmap];0.81[ASN][1000 genomes]
rs1947672	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2224985	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7086120	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7097229	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7097453	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73277915	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7901541	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44360000-44392200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44368400-44377200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:44373200-44376200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr10:44374000-44377000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr10:44374400-44377400	Weak transcription	Osteobl	bone
6	chr10:44374400-44378400	Weak transcription	HUVEC	blood vessel
7	chr10:44374400-44383400	Weak transcription	NHLF	lung
8	chr10:44374600-44377200	Weak transcription	HSMMtube	muscle
9	chr10:44374800-44377200	Weak transcription	Fetal Heart	heart
10	chr10:44375200-44378400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr10:44375800-44377200	Weak transcription	Right Atrium	heart
12	chr10:44375800-44377400	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr10:44375800-44377600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr10:44375800-44387400	Weak transcription	Left Ventricle	heart
15	chr10:44376000-44377000	Weak transcription	Right Ventricle	heart
16	chr10:44376000-44377200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr10:44376000-44377200	Weak transcription	NHDF-Ad	bronchial
18	chr10:44376000-44377400	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr10:44376000-44377600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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