Variant report

Variant	rs11238765
Chromosome Location	chr10:44375912-44375913
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10899926	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10899930	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10899931	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10899935	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899936	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899938	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10899939	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10899940	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899941	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899942	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899943	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10899949	1.00[CEU][hapmap];0.92[GIH][hapmap]
rs11238745	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11238747	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12242985	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12248836	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1325486	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1325490	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13313099	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1460540	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1675291	1.00[CHB][hapmap];0.91[CHD][hapmap];0.81[ASN][1000 genomes]
rs1947672	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2224985	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7086120	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7097229	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7097453	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73277915	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7901541	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44360000-44392200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44368400-44377200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:44373200-44376000	Enhancers	NHDF-Ad	bronchial
4	chr10:44373200-44376200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr10:44373400-44376000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
6	chr10:44373400-44376000	Enhancers	Right Ventricle	heart
7	chr10:44373400-44376000	Enhancers	Skeletal Muscle Male	skeletal muscle
8	chr10:44373600-44376000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr10:44373600-44376000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr10:44374000-44377000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr10:44374400-44377400	Weak transcription	Osteobl	bone
12	chr10:44374400-44378400	Weak transcription	HUVEC	blood vessel
13	chr10:44374400-44383400	Weak transcription	NHLF	lung
14	chr10:44374600-44377200	Weak transcription	HSMMtube	muscle
15	chr10:44374800-44377200	Weak transcription	Fetal Heart	heart
16	chr10:44375200-44378400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr10:44375400-44376000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr10:44375600-44376000	Enhancers	Rectal Smooth Muscle	rectum
19	chr10:44375800-44377200	Weak transcription	Right Atrium	heart
20	chr10:44375800-44377400	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr10:44375800-44377600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr10:44375800-44387400	Weak transcription	Left Ventricle	heart

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