Variant report

Variant	rs7901541
Chromosome Location	chr10:44375264-44375265
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10899926	0.90[ASN][1000 genomes]
rs10899930	0.90[ASN][1000 genomes]
rs10899931	0.90[ASN][1000 genomes]
rs10899935	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899936	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899938	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10899939	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10899940	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899941	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899942	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10899943	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10899949	1.00[CEU][hapmap]
rs11238745	0.93[ASN][1000 genomes]
rs11238747	0.93[ASN][1000 genomes]
rs11238765	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12242985	0.90[ASN][1000 genomes]
rs12248836	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1325486	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1325490	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13313099	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1460540	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1675291	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs1947672	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2224985	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7086120	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7097229	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7097453	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73277915	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44360000-44392200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44368400-44377200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:44373200-44375800	Enhancers	Muscle Satellite Cultured Cells	--
4	chr10:44373200-44375800	Enhancers	Left Ventricle	heart
5	chr10:44373200-44375800	Enhancers	Right Atrium	heart
6	chr10:44373200-44376000	Enhancers	NHDF-Ad	bronchial
7	chr10:44373200-44376200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr10:44373400-44375600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr10:44373400-44375800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr10:44373400-44375800	Enhancers	Adipose Nuclei	Adipose
11	chr10:44373400-44376000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
12	chr10:44373400-44376000	Enhancers	Right Ventricle	heart
13	chr10:44373400-44376000	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr10:44373600-44376000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr10:44373600-44376000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
16	chr10:44373800-44375400	Weak transcription	Spleen	Spleen
17	chr10:44374000-44377000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr10:44374400-44375400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr10:44374400-44377400	Weak transcription	Osteobl	bone
20	chr10:44374400-44378400	Weak transcription	HUVEC	blood vessel
21	chr10:44374400-44383400	Weak transcription	NHLF	lung
22	chr10:44374600-44377200	Weak transcription	HSMMtube	muscle
23	chr10:44374800-44375800	Enhancers	Pancreas	Pancrea
24	chr10:44374800-44377200	Weak transcription	Fetal Heart	heart
25	chr10:44375200-44378400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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