The 2.0 version of rSNPBase

Variant report

Variant rs10912778
Chromosome Location chr1:174362965-174362966
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174315600-174366400 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr1:174318800-174369800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:174322400-174363000 Weak transcription Primary hematopoietic stem cells blood
4 chr1:174325800-174382800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:174328800-174366400 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr1:174341800-174372200 Weak transcription Rectal Smooth Muscle rectum
7 chr1:174351000-174369000 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:174352000-174366000 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:174352200-174366400 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:174353000-174382600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:174353600-174372000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:174355400-174364800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:174357800-174375000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:174358600-174368400 Weak transcription Thymus Thymus
15 chr1:174359400-174369200 Weak transcription Fetal Muscle Trunk muscle
16 chr1:174359600-174366200 Weak transcription Duodenum Mucosa Duodenum
17 chr1:174360000-174370800 Weak transcription Pancreas Pancrea
18 chr1:174360000-174383000 Weak transcription Right Atrium heart
19 chr1:174360200-174366400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:174360200-174370200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:174361200-174369000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:174361400-174375600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:174361600-174366600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:174361600-174382800 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr1:174361800-174363200 Strong transcription Left Ventricle heart
26 chr1:174361800-174365000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:174361800-174370000 Weak transcription K562 blood
28 chr1:174362000-174363200 ZNF genes & repeats Primary B cells from cord blood blood
29 chr1:174362000-174363400 Strong transcription Primary T cells from cord blood blood
30 chr1:174362200-174363400 Strong transcription Primary B cells from peripheral blood blood
31 chr1:174362200-174363400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:174362200-174363400 ZNF genes & repeats GM12878-XiMat blood
33 chr1:174362200-174363600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:174362200-174364800 Strong transcription Primary T cells fromperipheralblood blood
35 chr1:174362200-174366800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:174362400-174363400 ZNF genes & repeats Aorta Aorta
37 chr1:174362400-174363800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:174362400-174363800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
39 chr1:174362600-174363000 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:174362600-174363200 ZNF genes & repeats Esophagus oesophagus
41 chr1:174362600-174363600 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr1:174362600-174363800 ZNF genes & repeats Fetal Intestine Small intestine
43 chr1:174362800-174364400 Strong transcription Fetal Intestine Large intestine
44 chr1:174362800-174366200 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015