The 2.0 version of rSNPBase

Variant report

Variant rs6701911
Chromosome Location chr1:174333893-174333894
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174298000-174361800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr1:174310600-174362400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:174315600-174366400 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:174317400-174342400 Weak transcription Primary B cells from peripheral blood blood
5 chr1:174318800-174369800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:174319200-174362600 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:174322400-174363000 Weak transcription Primary hematopoietic stem cells blood
8 chr1:174322600-174334000 Weak transcription Gastric stomach
9 chr1:174325800-174382800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:174326200-174334000 Weak transcription Pancreas Pancrea
11 chr1:174326400-174346800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:174327400-174334000 Weak transcription Primary B cells from cord blood blood
13 chr1:174327400-174362000 Weak transcription Primary T cells from cord blood blood
14 chr1:174327600-174362200 Weak transcription Aorta Aorta
15 chr1:174328600-174343800 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:174328600-174345600 Weak transcription Duodenum Mucosa Duodenum
17 chr1:174328800-174347200 Weak transcription Fetal Intestine Small intestine
18 chr1:174328800-174366400 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr1:174332000-174336600 Weak transcription GM12878-XiMat blood
20 chr1:174332800-174334000 Weak transcription Brain Substantia Nigra brain
21 chr1:174333800-174334000 Enhancers Brain Hippocampus Middle brain
22 chr1:174333800-174334200 Flanking Active TSS Brain Cingulate Gyrus brain
23 chr1:174333800-174334600 Enhancers Brain Anterior Caudate brain
24 chr1:174333800-174335000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
25 chr1:174333800-174343400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015