The 2.0 version of rSNPBase

Variant report

Variant rs35425383
Chromosome Location chr1:174342264-174342265
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174298000-174361800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr1:174310600-174362400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:174315600-174366400 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:174317400-174342400 Weak transcription Primary B cells from peripheral blood blood
5 chr1:174318800-174369800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:174319200-174362600 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:174322400-174363000 Weak transcription Primary hematopoietic stem cells blood
8 chr1:174325800-174382800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:174326400-174346800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:174327400-174362000 Weak transcription Primary T cells from cord blood blood
11 chr1:174327600-174362200 Weak transcription Aorta Aorta
12 chr1:174328600-174343800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:174328600-174345600 Weak transcription Duodenum Mucosa Duodenum
14 chr1:174328800-174347200 Weak transcription Fetal Intestine Small intestine
15 chr1:174328800-174366400 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr1:174333800-174343400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:174334800-174361800 Weak transcription Left Ventricle heart
18 chr1:174335000-174349600 Weak transcription Pancreas Pancrea
19 chr1:174335000-174361800 Weak transcription Primary B cells from cord blood blood
20 chr1:174339000-174345000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:174339400-174346600 Weak transcription Fetal Heart heart
22 chr1:174339600-174342600 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:174340200-174345200 Weak transcription Adipose Nuclei Adipose
24 chr1:174340400-174347000 Weak transcription Thymus Thymus
25 chr1:174341200-174353400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:174341400-174342400 Enhancers Fetal Brain Male brain
27 chr1:174341400-174342800 Enhancers HUES48 Cell Line embryonic stem cell
28 chr1:174341600-174342800 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr1:174341800-174344000 Strong transcription GM12878-XiMat blood
30 chr1:174341800-174372200 Weak transcription Rectal Smooth Muscle rectum
31 chr1:174342000-174342400 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr1:174342000-174342600 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr1:174342000-174342600 Enhancers H1 Cell Line embryonic stem cell
34 chr1:174342000-174342600 Enhancers HUES64 Cell Line embryonic stem cell
35 chr1:174342000-174342600 Enhancers Dnd41 blood
36 chr1:174342000-174342800 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr1:174342000-174343000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:174342200-174342600 Enhancers HUES6 Cell Line embryonic stem cell
39 chr1:174342200-174342800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015