The 2.0 version of rSNPBase

Variant report

Variant rs12084291
Chromosome Location chr1:174364859-174364860
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174315600-174366400 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr1:174318800-174369800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:174325800-174382800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:174328800-174366400 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr1:174341800-174372200 Weak transcription Rectal Smooth Muscle rectum
6 chr1:174351000-174369000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:174352000-174366000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:174352200-174366400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr1:174353000-174382600 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:174353600-174372000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:174357800-174375000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:174358600-174368400 Weak transcription Thymus Thymus
13 chr1:174359400-174369200 Weak transcription Fetal Muscle Trunk muscle
14 chr1:174359600-174366200 Weak transcription Duodenum Mucosa Duodenum
15 chr1:174360000-174370800 Weak transcription Pancreas Pancrea
16 chr1:174360000-174383000 Weak transcription Right Atrium heart
17 chr1:174360200-174366400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:174360200-174370200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:174361200-174369000 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr1:174361400-174375600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:174361600-174366600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:174361600-174382800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:174361800-174365000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:174361800-174370000 Weak transcription K562 blood
25 chr1:174362200-174366800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:174362800-174366200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr1:174363000-174367600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:174363000-174375800 Weak transcription NHDF-Ad bronchial
29 chr1:174363200-174366400 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr1:174363200-174374000 Weak transcription Esophagus oesophagus
31 chr1:174363200-174382800 Weak transcription Left Ventricle heart
32 chr1:174363400-174365800 Weak transcription Primary T cells from cord blood blood
33 chr1:174363400-174366200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:174363400-174366400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:174363400-174366400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:174363400-174366400 Weak transcription GM12878-XiMat blood
37 chr1:174363400-174366800 Weak transcription Primary hematopoietic stem cells blood
38 chr1:174363400-174367000 Weak transcription Adipose Nuclei Adipose
39 chr1:174363400-174367000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr1:174363400-174367600 Weak transcription Brain Inferior Temporal Lobe brain
41 chr1:174363400-174368600 Weak transcription Ovary ovary
42 chr1:174363400-174372800 Weak transcription Lung lung
43 chr1:174363400-174375800 Weak transcription Gastric stomach
44 chr1:174363600-174366000 Weak transcription Fetal Stomach stomach
45 chr1:174363600-174366400 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr1:174363600-174366400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:174363600-174366600 Weak transcription Brain Hippocampus Middle brain
48 chr1:174363600-174366800 Weak transcription NHEK skin
49 chr1:174363600-174369400 Weak transcription Dnd41 blood
50 chr1:174363800-174366000 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015