Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34828929..34832909-chr11:34833620..34837580,5	K562	blood:

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs2915186	0.91[ASN][1000 genomes]
rs473848	0.91[ASN][1000 genomes]
rs473885	0.91[ASN][1000 genomes]
rs483976	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs485845	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs496558	0.91[EUR][1000 genomes]
rs498798	0.94[ASN][1000 genomes]
rs499183	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs508062	0.89[ASN][1000 genomes]
rs512013	0.89[ASN][1000 genomes]
rs516228	0.85[EUR][1000 genomes]
rs523246	0.89[ASN][1000 genomes]
rs535719	0.83[EUR][1000 genomes]
rs537364	0.85[EUR][1000 genomes]
rs537873	0.98[ASN][1000 genomes]
rs539044	0.85[EUR][1000 genomes]
rs546131	0.83[EUR][1000 genomes]
rs546521	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs547504	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs548967	0.91[ASN][1000 genomes]
rs550313	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs552171	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs552627	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs552868	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs553789	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs558967	0.91[EUR][1000 genomes]
rs561477	0.91[ASN][1000 genomes]
rs566798	0.91[ASN][1000 genomes]
rs568529	0.89[ASN][1000 genomes]
rs572690	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs578002	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs579926	0.91[ASN][1000 genomes]
rs744841	0.81[EUR][1000 genomes]
rs836950	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832118	chr11:34743123-34903951	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv832119	chr11:34815528-35009370	Strong transcription Enhancers Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34832400-34846000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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