Variant report

Variant rs547504
Chromosome Location chr11:34847225-34847226
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34844400-34847800 Enhancers Brain Angular Gyrus brain
2 chr11:34844800-34847600 Enhancers Brain Inferior Temporal Lobe brain
3 chr11:34844800-34848000 Enhancers Brain Anterior Caudate brain
4 chr11:34844800-34848000 Enhancers Brain Hippocampus Middle brain
5 chr11:34844800-34848200 Enhancers Brain Cingulate Gyrus brain
6 chr11:34844800-34848200 Enhancers Brain Substantia Nigra brain
7 chr11:34844800-34849400 Enhancers Stomach Mucosa stomach
8 chr11:34845000-34849400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr11:34845200-34847800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:34845400-34848600 Enhancers Fetal Intestine Large intestine
11 chr11:34845400-34849400 Enhancers Rectal Mucosa Donor 29 rectum
12 chr11:34845600-34847600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
13 chr11:34845600-34849000 Weak transcription Liver Liver
14 chr11:34846000-34848200 Enhancers Esophagus oesophagus
15 chr11:34846000-34848200 Enhancers Fetal Intestine Small intestine
16 chr11:34846000-34848400 Enhancers HMEC breast
17 chr11:34846000-34849000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr11:34846200-34848000 Flanking Active TSS HepG2 liver
19 chr11:34846400-34847600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr11:34846600-34847600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr11:34846600-34848200 Enhancers NHEK skin
22 chr11:34846600-34848400 Enhancers Duodenum Mucosa Duodenum
23 chr11:34846600-34848800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr11:34846600-34848800 Enhancers K562 blood
25 chr11:34846800-34847400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr11:34846800-34847600 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr11:34846800-34847600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
28 chr11:34846800-34847800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr11:34846800-34848000 Enhancers Placenta Amnion Placenta Amnion
30 chr11:34847000-34847800 Enhancers A549 lung
31 chr11:34847000-34848000 Weak transcription Pancreas Pancrea
32 chr11:34847000-34849200 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr11:34847000-34852000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr11:34847200-34847400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr11:34847200-34847600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr11:34847200-34847800 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr11:34847200-34858400 Weak transcription ES-I3 Cell Line embryonic stem cell

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