Variant report

Variant	rs11014453
Chromosome Location	chr10:25525953-25525954
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10508689	1.00[CEU][hapmap];0.83[JPT][hapmap];0.83[EUR][1000 genomes]
rs10828768	0.94[CHB][hapmap];0.94[JPT][hapmap]
rs11014448	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11014449	0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11014450	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11014451	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11014452	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11014456	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs11014474	1.00[CEU][hapmap]
rs11014478	1.00[CHB][hapmap]
rs11014481	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs12263037	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs12358959	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs1334058	0.84[JPT][hapmap]
rs1339999	1.00[CEU][hapmap]
rs1413394	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs1416995	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs16925470	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs16925472	1.00[CEU][hapmap]
rs16925478	0.84[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16925515	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs1926055	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1931293	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4749015	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs7902135	1.00[CHB][hapmap];0.94[JPT][hapmap];0.84[YRI][hapmap]
rs7923252	1.00[CEU][hapmap]
rs915027	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs915028	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs959334	1.00[CHB][hapmap];0.94[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761583	chr10:25525657-25722444	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25522600-25526600	Weak transcription	Brain Anterior Caudate	brain

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