Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10508689	0.80[JPT][hapmap]
rs10828767	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10828768	1.00[CEU][hapmap];0.94[CHB][hapmap];0.86[JPT][hapmap]
rs11014452	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs11014453	1.00[CHB][hapmap]
rs11014456	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs11014474	0.95[EUR][1000 genomes]
rs11014481	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12263037	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs12358959	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs1334058	1.00[CEU][hapmap];0.90[YRI][hapmap]
rs1413394	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs1416995	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs16925478	0.84[CHB][hapmap];0.86[JPT][hapmap]
rs16925515	1.00[CHB][hapmap];0.87[JPT][hapmap];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1926055	0.90[CHB][hapmap];0.83[JPT][hapmap]
rs1931293	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs4749015	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs7902135	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs7923252	0.90[JPT][hapmap];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs915027	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs915028	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs915029	0.81[JPT][hapmap]
rs959334	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9988748	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761583	chr10:25525657-25722444	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25554400-25563400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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