Variant report
Variant | rs11029166 |
---|---|
Chromosome Location | chr11:26108341-26108342 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10501037 | 1.00[ASN][1000 genomes] |
rs11029120 | 0.82[ASN][1000 genomes] |
rs11029127 | 1.00[ASN][1000 genomes] |
rs11029128 | 1.00[ASN][1000 genomes] |
rs11029130 | 1.00[ASN][1000 genomes] |
rs11029132 | 1.00[ASN][1000 genomes] |
rs11029133 | 1.00[ASN][1000 genomes] |
rs11029136 | 1.00[ASN][1000 genomes] |
rs11029137 | 1.00[ASN][1000 genomes] |
rs11029138 | 1.00[ASN][1000 genomes] |
rs11029139 | 1.00[ASN][1000 genomes] |
rs11029140 | 1.00[ASN][1000 genomes] |
rs11029142 | 1.00[ASN][1000 genomes] |
rs11029143 | 1.00[ASN][1000 genomes] |
rs11029144 | 1.00[ASN][1000 genomes] |
rs11029145 | 1.00[ASN][1000 genomes] |
rs11029146 | 1.00[ASN][1000 genomes] |
rs11029147 | 1.00[ASN][1000 genomes] |
rs11029148 | 1.00[ASN][1000 genomes] |
rs11029149 | 1.00[ASN][1000 genomes] |
rs11029150 | 1.00[ASN][1000 genomes] |
rs11029151 | 1.00[ASN][1000 genomes] |
rs11029152 | 1.00[ASN][1000 genomes] |
rs11029153 | 1.00[ASN][1000 genomes] |
rs11029154 | 1.00[ASN][1000 genomes] |
rs11029155 | 1.00[ASN][1000 genomes] |
rs11029156 | 1.00[ASN][1000 genomes] |
rs11029157 | 1.00[ASN][1000 genomes] |
rs11029158 | 1.00[ASN][1000 genomes] |
rs11029159 | 1.00[ASN][1000 genomes] |
rs11029160 | 1.00[ASN][1000 genomes] |
rs11029161 | 1.00[ASN][1000 genomes] |
rs11029162 | 1.00[ASN][1000 genomes] |
rs11029163 | 1.00[ASN][1000 genomes] |
rs11029164 | 1.00[ASN][1000 genomes] |
rs11029165 | 1.00[ASN][1000 genomes] |
rs11029167 | 1.00[ASN][1000 genomes] |
rs11029168 | 1.00[ASN][1000 genomes] |
rs11029169 | 1.00[ASN][1000 genomes] |
rs11029170 | 1.00[ASN][1000 genomes] |
rs11029171 | 1.00[ASN][1000 genomes] |
rs11029172 | 1.00[ASN][1000 genomes] |
rs11029173 | 1.00[ASN][1000 genomes] |
rs11029174 | 1.00[ASN][1000 genomes] |
rs11029175 | 1.00[ASN][1000 genomes] |
rs11029176 | 1.00[ASN][1000 genomes] |
rs11029177 | 1.00[ASN][1000 genomes] |
rs11029178 | 1.00[ASN][1000 genomes] |
rs11029183 | 1.00[ASN][1000 genomes] |
rs11029184 | 1.00[ASN][1000 genomes] |
rs11029185 | 1.00[ASN][1000 genomes] |
rs11029188 | 0.92[ASN][1000 genomes] |
rs11029189 | 1.00[ASN][1000 genomes] |
rs11029190 | 1.00[ASN][1000 genomes] |
rs11029191 | 1.00[ASN][1000 genomes] |
rs11029192 | 1.00[ASN][1000 genomes] |
rs11029194 | 1.00[ASN][1000 genomes] |
rs11029195 | 1.00[ASN][1000 genomes] |
rs11029196 | 1.00[ASN][1000 genomes] |
rs11029197 | 1.00[ASN][1000 genomes] |
rs11029198 | 1.00[ASN][1000 genomes] |
rs11029199 | 1.00[ASN][1000 genomes] |
rs11029200 | 1.00[ASN][1000 genomes] |
rs11029201 | 1.00[ASN][1000 genomes] |
rs11029203 | 1.00[ASN][1000 genomes] |
rs11029204 | 1.00[ASN][1000 genomes] |
rs11029205 | 1.00[ASN][1000 genomes] |
rs11029210 | 1.00[ASN][1000 genomes] |
rs11029243 | 0.82[ASN][1000 genomes] |
rs11029244 | 0.82[ASN][1000 genomes] |
rs12222395 | 0.82[ASN][1000 genomes] |
rs12222406 | 0.82[ASN][1000 genomes] |
rs12223917 | 0.82[ASN][1000 genomes] |
rs12224552 | 1.00[ASN][1000 genomes] |
rs1387490 | 1.00[ASN][1000 genomes] |
rs1387491 | 1.00[ASN][1000 genomes] |
rs1387492 | 1.00[ASN][1000 genomes] |
rs1489508 | 1.00[ASN][1000 genomes] |
rs1489509 | 1.00[ASN][1000 genomes] |
rs1489510 | 1.00[ASN][1000 genomes] |
rs1489511 | 1.00[ASN][1000 genomes] |
rs16915262 | 1.00[ASN][1000 genomes] |
rs16915268 | 1.00[ASN][1000 genomes] |
rs2349610 | 1.00[ASN][1000 genomes] |
rs2349611 | 1.00[ASN][1000 genomes] |
rs4360660 | 1.00[ASN][1000 genomes] |
rs4572089 | 1.00[ASN][1000 genomes] |
rs59456245 | 1.00[ASN][1000 genomes] |
rs61688636 | 1.00[ASN][1000 genomes] |
rs66633054 | 1.00[ASN][1000 genomes] |
rs66648383 | 1.00[ASN][1000 genomes] |
rs66699863 | 1.00[ASN][1000 genomes] |
rs72885762 | 1.00[ASN][1000 genomes] |
rs73435407 | 1.00[ASN][1000 genomes] |
rs73435414 | 1.00[ASN][1000 genomes] |
rs73435415 | 1.00[ASN][1000 genomes] |
rs73435418 | 1.00[ASN][1000 genomes] |
rs73435435 | 1.00[ASN][1000 genomes] |
rs73435438 | 1.00[ASN][1000 genomes] |
rs73435442 | 1.00[ASN][1000 genomes] |
rs73435450 | 1.00[ASN][1000 genomes] |
rs73435451 | 1.00[ASN][1000 genomes] |
rs73435502 | 1.00[ASN][1000 genomes] |
rs7935278 | 1.00[ASN][1000 genomes] |
rs7935406 | 1.00[ASN][1000 genomes] |
rs7938817 | 1.00[ASN][1000 genomes] |
rs7952271 | 1.00[ASN][1000 genomes] |
rs9633820 | 1.00[ASN][1000 genomes] |
rs9633821 | 1.00[ASN][1000 genomes] |
rs9633854 | 1.00[ASN][1000 genomes] |
rs9633855 | 1.00[ASN][1000 genomes] |
rs977800 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2760599 | chr11:25186984-26159450 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
2 | nsv1046507 | chr11:25469712-26111707 | Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
3 | nsv972917 | chr11:26104722-26110818 | Enhancers Weak transcription Flanking Active TSS Active TSS | n/a | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:26101200-26109200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
2 | chr11:26101400-26112600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
3 | chr11:26102200-26109600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
4 | chr11:26106800-26109400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
5 | chr11:26107000-26108800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
6 | chr11:26107200-26108800 | Enhancers | Primary B cells from cord blood | blood |
7 | chr11:26107400-26108800 | Enhancers | Primary B cells from peripheral blood | blood |
8 | chr11:26107600-26108600 | Flanking Active TSS | GM12878-XiMat | blood |
9 | chr11:26107800-26109200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
10 | chr11:26108200-26108600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |