Variant report

Variant	rs11029188
Chromosome Location	chr11:26125475-26125476
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 128 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:127)

rs_ID	r²[population]
rs10501037	0.92[ASN][1000 genomes]
rs10734366	1.00[CHB][hapmap]
rs10742127	1.00[CHB][hapmap]
rs10742128	1.00[CHB][hapmap]
rs10834897	1.00[CHB][hapmap]
rs10834898	1.00[CHB][hapmap]
rs11029114	1.00[CHB][hapmap]
rs11029127	0.92[ASN][1000 genomes]
rs11029128	0.92[ASN][1000 genomes]
rs11029130	0.92[ASN][1000 genomes]
rs11029132	0.92[ASN][1000 genomes]
rs11029133	0.92[ASN][1000 genomes]
rs11029136	0.92[ASN][1000 genomes]
rs11029137	0.92[ASN][1000 genomes]
rs11029138	0.92[ASN][1000 genomes]
rs11029139	0.92[ASN][1000 genomes]
rs11029140	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029142	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029143	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11029144	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029145	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029146	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029147	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029148	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029149	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029150	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029151	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029152	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029153	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029154	0.92[ASN][1000 genomes]
rs11029155	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029156	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029157	0.92[ASN][1000 genomes]
rs11029158	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029159	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029160	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029161	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029162	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029163	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029164	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029165	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029166	0.92[ASN][1000 genomes]
rs11029167	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029168	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029169	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029170	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029171	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029172	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029173	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029174	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029175	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029176	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029177	0.92[ASN][1000 genomes]
rs11029178	0.92[ASN][1000 genomes]
rs11029183	0.92[ASN][1000 genomes]
rs11029184	0.92[ASN][1000 genomes]
rs11029185	0.92[ASN][1000 genomes]
rs11029189	0.92[ASN][1000 genomes]
rs11029190	0.92[ASN][1000 genomes]
rs11029191	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029192	0.92[ASN][1000 genomes]
rs11029194	0.92[ASN][1000 genomes]
rs11029195	0.92[ASN][1000 genomes]
rs11029196	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029197	0.92[ASN][1000 genomes]
rs11029198	0.92[ASN][1000 genomes]
rs11029199	0.92[ASN][1000 genomes]
rs11029200	0.92[ASN][1000 genomes]
rs11029201	0.92[ASN][1000 genomes]
rs11029203	0.92[ASN][1000 genomes]
rs11029204	0.92[ASN][1000 genomes]
rs11029205	0.92[ASN][1000 genomes]
rs11029210	0.92[ASN][1000 genomes]
rs12224552	0.92[ASN][1000 genomes]
rs12225865	1.00[CHB][hapmap]
rs1387490	0.92[ASN][1000 genomes]
rs1387491	0.92[ASN][1000 genomes]
rs1387492	0.92[ASN][1000 genomes]
rs1387503	1.00[CHB][hapmap]
rs1387507	1.00[CHB][hapmap]
rs1489508	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1489509	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1489510	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1489511	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs16915262	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs16915268	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2349610	0.92[ASN][1000 genomes]
rs2349611	0.92[ASN][1000 genomes]
rs3926027	0.82[EUR][1000 genomes]
rs4360660	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4572089	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59456245	0.92[ASN][1000 genomes]
rs61688636	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6484193	1.00[CHB][hapmap]
rs66633054	0.92[ASN][1000 genomes]
rs66648383	0.92[ASN][1000 genomes]
rs66699863	0.92[ASN][1000 genomes]
rs7101817	1.00[CHB][hapmap]
rs7105188	1.00[CHB][hapmap]
rs7105339	1.00[CHB][hapmap]
rs7115939	1.00[CHB][hapmap]
rs7116083	1.00[CHB][hapmap]
rs7119696	1.00[CHB][hapmap]
rs7123678	1.00[CHB][hapmap]
rs72885762	0.92[ASN][1000 genomes]
rs73435407	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435414	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435415	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435418	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435435	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435438	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435442	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435450	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435451	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73435502	0.92[ASN][1000 genomes]
rs7935278	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7935406	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7938817	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7952271	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9633820	0.92[ASN][1000 genomes]
rs9633821	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9633854	0.92[ASN][1000 genomes]
rs9633855	0.92[ASN][1000 genomes]
rs977800	0.92[ASN][1000 genomes]
rs988513	1.00[CHB][hapmap]
rs988514	1.00[CHB][hapmap]
rs988516	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760599	chr11:25186984-26159450	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26120000-26130200	Weak transcription	Fetal Lung	lung
2	chr11:26124200-26127800	Weak transcription	Primary B cells from cord blood	blood

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