Variant report

Variant	rs11031900
Chromosome Location	chr11:32643717-32643718
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10835955	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs11031888	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11031889	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11031928	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs11031939	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031949	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11031951	0.94[CEU][hapmap];1.00[JPT][hapmap]
rs11031952	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs11031975	1.00[AFR][1000 genomes]
rs11031978	0.94[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes]
rs11031994	0.87[AFR][1000 genomes]
rs11031999	0.87[AFR][1000 genomes]
rs12365215	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12365339	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs1396994	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs17249466	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4755378	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3424973	chr11:32633425-32664062	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11031900	PRRG4	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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