Variant report

Variant rs11085409
Chromosome Location chr19:21129230-21129231
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21106600-21129800 Weak transcription Stomach Mucosa stomach
2 chr19:21106800-21131000 Weak transcription Gastric stomach
3 chr19:21107000-21133200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr19:21107200-21132600 Weak transcription Brain Hippocampus Middle brain
5 chr19:21107200-21133800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:21107400-21131600 Weak transcription H9 Cell Line embryonic stem cell
7 chr19:21107600-21133400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr19:21111800-21131000 Weak transcription NH-A brain
9 chr19:21114400-21132800 Weak transcription Colon Smooth Muscle Colon
10 chr19:21116600-21133400 Weak transcription Rectal Smooth Muscle rectum
11 chr19:21118400-21131600 Weak transcription Fetal Thymus thymus
12 chr19:21120000-21133200 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr19:21121200-21130400 Weak transcription Pancreas Pancrea
14 chr19:21122200-21133400 Weak transcription Brain Substantia Nigra brain
15 chr19:21125400-21129600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
16 chr19:21125600-21129800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
17 chr19:21125600-21134000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
18 chr19:21125600-21134200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr19:21125800-21131600 Weak transcription Fetal Heart heart
20 chr19:21126000-21133000 ZNF genes & repeats Dnd41 blood
21 chr19:21126400-21131200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr19:21126400-21131200 Weak transcription Fetal Intestine Large intestine
23 chr19:21126400-21131400 Weak transcription HSMMtube muscle
24 chr19:21126400-21133000 Weak transcription Ovary ovary
25 chr19:21126400-21133200 Weak transcription Stomach Smooth Muscle stomach
26 chr19:21126400-21133600 Weak transcription Left Ventricle heart
27 chr19:21126600-21131000 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr19:21126600-21131400 Weak transcription Placenta Amnion Placenta Amnion
29 chr19:21126600-21133600 Weak transcription Thymus Thymus
30 chr19:21127000-21129800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
31 chr19:21127000-21133000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
32 chr19:21127000-21133400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
33 chr19:21127200-21129400 Weak transcription Fetal Kidney kidney
34 chr19:21127200-21132200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr19:21127600-21129800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
36 chr19:21128000-21129600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
37 chr19:21128000-21129600 ZNF genes & repeats Fetal Lung lung
38 chr19:21128000-21131200 Weak transcription ES-WA7 Cell Line embryonic stem cell
39 chr19:21128000-21133000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr19:21128400-21130800 Weak transcription Fetal Muscle Leg muscle
41 chr19:21128400-21130800 Weak transcription NHDF-Ad bronchial
42 chr19:21128400-21131000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr19:21128600-21129400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr19:21128600-21130000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr19:21128600-21132600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr19:21128600-21133600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr19:21128800-21130400 Weak transcription Muscle Satellite Cultured Cells --
48 chr19:21128800-21130800 Weak transcription Primary B cells from peripheral blood blood
49 chr19:21128800-21130800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr19:21128800-21131000 Weak transcription Cortex derived primary cultured neurospheres brain

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