The 2.0 version of rSNPBase

Variant report

Variant rs11669193
Chromosome Location chr19:21125401-21125402
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21106600-21129800 Weak transcription Stomach Mucosa stomach
2 chr19:21106800-21125600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr19:21106800-21128200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr19:21106800-21131000 Weak transcription Gastric stomach
5 chr19:21107000-21125800 Weak transcription Psoas Muscle Psoas
6 chr19:21107000-21128000 Weak transcription Primary T cells fromperipheralblood blood
7 chr19:21107000-21133200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr19:21107200-21127200 Weak transcription Brain Angular Gyrus brain
9 chr19:21107200-21127400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr19:21107200-21132600 Weak transcription Brain Hippocampus Middle brain
11 chr19:21107200-21133800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:21107400-21125600 Weak transcription Stomach Smooth Muscle stomach
13 chr19:21107400-21125600 Weak transcription HUVEC blood vessel
14 chr19:21107400-21128000 Weak transcription NHDF-Ad bronchial
15 chr19:21107400-21131600 Weak transcription H9 Cell Line embryonic stem cell
16 chr19:21107600-21127000 Weak transcription Fetal Kidney kidney
17 chr19:21107600-21133400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:21111800-21131000 Weak transcription NH-A brain
19 chr19:21113600-21127200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:21113800-21126000 Strong transcription Dnd41 blood
21 chr19:21114400-21132800 Weak transcription Colon Smooth Muscle Colon
22 chr19:21114800-21125600 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr19:21116000-21126200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr19:21116600-21133400 Weak transcription Rectal Smooth Muscle rectum
25 chr19:21116800-21126600 ZNF genes & repeats Primary hematopoietic stem cells blood
26 chr19:21117600-21126600 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr19:21117800-21128400 Strong transcription Primary B cells from peripheral blood blood
28 chr19:21118000-21127200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
29 chr19:21118200-21125600 Weak transcription Placenta Placenta
30 chr19:21118400-21131600 Weak transcription Fetal Thymus thymus
31 chr19:21119200-21129200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr19:21119600-21125600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr19:21120000-21133200 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr19:21120600-21126600 Strong transcription Thymus Thymus
35 chr19:21120600-21128200 Weak transcription Esophagus oesophagus
36 chr19:21120800-21125800 Weak transcription HSMMtube muscle
37 chr19:21120800-21126000 Weak transcription GM12878-XiMat blood
38 chr19:21120800-21126800 Weak transcription NHEK skin
39 chr19:21120800-21128200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr19:21121000-21125600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr19:21121000-21126200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr19:21121200-21130400 Weak transcription Pancreas Pancrea
43 chr19:21121400-21125600 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr19:21121400-21125600 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr19:21121400-21125600 Weak transcription Fetal Muscle Leg muscle
46 chr19:21121400-21125600 Weak transcription Ovary ovary
47 chr19:21122200-21133400 Weak transcription Brain Substantia Nigra brain
48 chr19:21122600-21126400 Strong transcription Left Ventricle heart
49 chr19:21122600-21128000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr19:21122800-21125600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015