The 2.0 version of rSNPBase

Variant report

Variant rs35959824
Chromosome Location chr19:21128150-21128151
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21106600-21129800 Weak transcription Stomach Mucosa stomach
2 chr19:21106800-21128200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr19:21106800-21131000 Weak transcription Gastric stomach
4 chr19:21107000-21133200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:21107200-21132600 Weak transcription Brain Hippocampus Middle brain
6 chr19:21107200-21133800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:21107400-21131600 Weak transcription H9 Cell Line embryonic stem cell
8 chr19:21107600-21133400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr19:21111800-21131000 Weak transcription NH-A brain
10 chr19:21114400-21132800 Weak transcription Colon Smooth Muscle Colon
11 chr19:21116600-21133400 Weak transcription Rectal Smooth Muscle rectum
12 chr19:21117800-21128400 Strong transcription Primary B cells from peripheral blood blood
13 chr19:21118400-21131600 Weak transcription Fetal Thymus thymus
14 chr19:21119200-21129200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr19:21120000-21133200 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr19:21120600-21128200 Weak transcription Esophagus oesophagus
17 chr19:21120800-21128200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr19:21121200-21130400 Weak transcription Pancreas Pancrea
19 chr19:21122200-21133400 Weak transcription Brain Substantia Nigra brain
20 chr19:21122800-21128800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr19:21123000-21128800 Strong transcription Cortex derived primary cultured neurospheres brain
22 chr19:21123000-21129000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr19:21123200-21128200 Weak transcription Fetal Stomach stomach
24 chr19:21124600-21129000 ZNF genes & repeats Primary B cells from cord blood blood
25 chr19:21125000-21129000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
26 chr19:21125400-21128600 Strong transcription Muscle Satellite Cultured Cells --
27 chr19:21125400-21129600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
28 chr19:21125600-21129000 Strong transcription HSMM muscle
29 chr19:21125600-21129800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
30 chr19:21125600-21134000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
31 chr19:21125600-21134200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr19:21125800-21128200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr19:21125800-21131600 Weak transcription Fetal Heart heart
34 chr19:21126000-21128800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr19:21126000-21133000 ZNF genes & repeats Dnd41 blood
36 chr19:21126200-21128600 Weak transcription HUVEC blood vessel
37 chr19:21126400-21128200 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr19:21126400-21128200 Weak transcription Placenta Placenta
39 chr19:21126400-21128600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr19:21126400-21128600 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr19:21126400-21128600 Weak transcription Osteobl bone
42 chr19:21126400-21131200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr19:21126400-21131200 Weak transcription Fetal Intestine Large intestine
44 chr19:21126400-21131400 Weak transcription HSMMtube muscle
45 chr19:21126400-21133000 Weak transcription Ovary ovary
46 chr19:21126400-21133200 Weak transcription Stomach Smooth Muscle stomach
47 chr19:21126400-21133600 Weak transcription Left Ventricle heart
48 chr19:21126600-21128200 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr19:21126600-21128200 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr19:21126600-21131000 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015