Variant report

Variant rs56094670
Chromosome Location chr19:21126562-21126563
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21106600-21129800 Weak transcription Stomach Mucosa stomach
2 chr19:21106800-21128200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr19:21106800-21131000 Weak transcription Gastric stomach
4 chr19:21107000-21128000 Weak transcription Primary T cells fromperipheralblood blood
5 chr19:21107000-21133200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:21107200-21127200 Weak transcription Brain Angular Gyrus brain
7 chr19:21107200-21127400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr19:21107200-21132600 Weak transcription Brain Hippocampus Middle brain
9 chr19:21107200-21133800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr19:21107400-21128000 Weak transcription NHDF-Ad bronchial
11 chr19:21107400-21131600 Weak transcription H9 Cell Line embryonic stem cell
12 chr19:21107600-21127000 Weak transcription Fetal Kidney kidney
13 chr19:21107600-21133400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr19:21111800-21131000 Weak transcription NH-A brain
15 chr19:21113600-21127200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr19:21114400-21132800 Weak transcription Colon Smooth Muscle Colon
17 chr19:21116600-21133400 Weak transcription Rectal Smooth Muscle rectum
18 chr19:21116800-21126600 ZNF genes & repeats Primary hematopoietic stem cells blood
19 chr19:21117600-21126600 Strong transcription HUES48 Cell Line embryonic stem cell
20 chr19:21117800-21128400 Strong transcription Primary B cells from peripheral blood blood
21 chr19:21118000-21127200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
22 chr19:21118400-21131600 Weak transcription Fetal Thymus thymus
23 chr19:21119200-21129200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr19:21120000-21133200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr19:21120600-21126600 Strong transcription Thymus Thymus
26 chr19:21120600-21128200 Weak transcription Esophagus oesophagus
27 chr19:21120800-21126800 Weak transcription NHEK skin
28 chr19:21120800-21128200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr19:21121200-21130400 Weak transcription Pancreas Pancrea
30 chr19:21122200-21133400 Weak transcription Brain Substantia Nigra brain
31 chr19:21122600-21128000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr19:21122800-21126800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
33 chr19:21122800-21128800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr19:21123000-21128800 Strong transcription Cortex derived primary cultured neurospheres brain
35 chr19:21123000-21129000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr19:21123200-21128200 Weak transcription Fetal Stomach stomach
37 chr19:21123400-21128000 Weak transcription Fetal Muscle Trunk muscle
38 chr19:21123600-21127800 Weak transcription Right Ventricle heart
39 chr19:21124400-21127200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:21124600-21129000 ZNF genes & repeats Primary B cells from cord blood blood
41 chr19:21125000-21127200 ZNF genes & repeats Fetal Lung lung
42 chr19:21125000-21127200 ZNF genes & repeats Lung lung
43 chr19:21125000-21127400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
44 chr19:21125000-21129000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
45 chr19:21125200-21126600 Strong transcription H1 Cell Line embryonic stem cell
46 chr19:21125200-21126600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr19:21125400-21126600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
48 chr19:21125400-21127200 ZNF genes & repeats Fetal Brain Female brain
49 chr19:21125400-21128600 Strong transcription Muscle Satellite Cultured Cells --
50 chr19:21125400-21129600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood

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