Variant report

Variant rs56204435
Chromosome Location chr19:21127545-21127546
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21106600-21129800 Weak transcription Stomach Mucosa stomach
2 chr19:21106800-21128200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr19:21106800-21131000 Weak transcription Gastric stomach
4 chr19:21107000-21128000 Weak transcription Primary T cells fromperipheralblood blood
5 chr19:21107000-21133200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:21107200-21132600 Weak transcription Brain Hippocampus Middle brain
7 chr19:21107200-21133800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:21107400-21128000 Weak transcription NHDF-Ad bronchial
9 chr19:21107400-21131600 Weak transcription H9 Cell Line embryonic stem cell
10 chr19:21107600-21133400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:21111800-21131000 Weak transcription NH-A brain
12 chr19:21114400-21132800 Weak transcription Colon Smooth Muscle Colon
13 chr19:21116600-21133400 Weak transcription Rectal Smooth Muscle rectum
14 chr19:21117800-21128400 Strong transcription Primary B cells from peripheral blood blood
15 chr19:21118400-21131600 Weak transcription Fetal Thymus thymus
16 chr19:21119200-21129200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr19:21120000-21133200 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr19:21120600-21128200 Weak transcription Esophagus oesophagus
19 chr19:21120800-21128200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr19:21121200-21130400 Weak transcription Pancreas Pancrea
21 chr19:21122200-21133400 Weak transcription Brain Substantia Nigra brain
22 chr19:21122600-21128000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr19:21122800-21128800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr19:21123000-21128800 Strong transcription Cortex derived primary cultured neurospheres brain
25 chr19:21123000-21129000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr19:21123200-21128200 Weak transcription Fetal Stomach stomach
27 chr19:21123400-21128000 Weak transcription Fetal Muscle Trunk muscle
28 chr19:21123600-21127800 Weak transcription Right Ventricle heart
29 chr19:21124600-21129000 ZNF genes & repeats Primary B cells from cord blood blood
30 chr19:21125000-21129000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
31 chr19:21125400-21128600 Strong transcription Muscle Satellite Cultured Cells --
32 chr19:21125400-21129600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
33 chr19:21125600-21129000 Strong transcription HSMM muscle
34 chr19:21125600-21129800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
35 chr19:21125600-21134000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
36 chr19:21125600-21134200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr19:21125800-21128200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr19:21125800-21131600 Weak transcription Fetal Heart heart
39 chr19:21126000-21128000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr19:21126000-21128800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr19:21126000-21133000 ZNF genes & repeats Dnd41 blood
42 chr19:21126200-21128600 Weak transcription HUVEC blood vessel
43 chr19:21126400-21127600 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr19:21126400-21127600 Weak transcription Adipose Nuclei Adipose
45 chr19:21126400-21128000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr19:21126400-21128000 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr19:21126400-21128000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr19:21126400-21128200 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr19:21126400-21128200 Weak transcription Placenta Placenta
50 chr19:21126400-21128600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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