The 2.0 version of rSNPBase

Variant report

Variant rs11118477
Chromosome Location chr1:220141069-220141070
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220129200-220145800 Weak transcription HepG2 liver
2 chr1:220132200-220144200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:220132400-220143200 Weak transcription Colonic Mucosa Colon
4 chr1:220132800-220177000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:220133000-220141200 Weak transcription Duodenum Mucosa Duodenum
6 chr1:220133600-220142200 Weak transcription Small Intestine intestine
7 chr1:220137200-220145800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:220137400-220142000 Weak transcription Pancreas Pancrea
9 chr1:220137600-220142200 Weak transcription Primary B cells from cord blood blood
10 chr1:220138000-220141400 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr1:220138000-220141400 Weak transcription HUVEC blood vessel
12 chr1:220138600-220143000 Weak transcription Ovary ovary
13 chr1:220138800-220141200 Weak transcription HSMM muscle
14 chr1:220138800-220141400 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:220138800-220141600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:220138800-220142000 Weak transcription Fetal Intestine Small intestine
17 chr1:220139000-220141400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:220139200-220141200 Weak transcription Osteobl bone
19 chr1:220139200-220141400 Weak transcription Thymus Thymus
20 chr1:220139200-220141600 Weak transcription Placenta Amnion Placenta Amnion
21 chr1:220139200-220141600 Weak transcription Rectal Smooth Muscle rectum
22 chr1:220139200-220145400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:220139400-220141400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr1:220139400-220141400 Weak transcription Brain Germinal Matrix brain
25 chr1:220139400-220143600 Weak transcription NHEK skin
26 chr1:220139400-220146000 Weak transcription Colon Smooth Muscle Colon
27 chr1:220139400-220154000 Weak transcription Fetal Lung lung
28 chr1:220139600-220141200 Weak transcription H1 Cell Line embryonic stem cell
29 chr1:220139600-220141200 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:220139600-220141200 Weak transcription Adipose Nuclei Adipose
31 chr1:220139600-220141200 Weak transcription Brain Substantia Nigra brain
32 chr1:220139600-220141200 Weak transcription NH-A brain
33 chr1:220139600-220141400 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr1:220139600-220141400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:220139600-220141400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:220139600-220141400 Weak transcription HMEC breast
37 chr1:220139600-220143600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:220139600-220144600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:220139800-220141200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr1:220139800-220141400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr1:220139800-220141400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:220139800-220141400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr1:220139800-220141400 Weak transcription Brain Cingulate Gyrus brain
44 chr1:220139800-220141400 Weak transcription Brain Hippocampus Middle brain
45 chr1:220139800-220141400 Weak transcription Dnd41 blood
46 chr1:220139800-220141600 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr1:220139800-220141600 Weak transcription Primary monocytes fromperipheralblood blood
48 chr1:220139800-220141600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr1:220139800-220143600 Weak transcription Fetal Brain Female brain
50 chr1:220140000-220141600 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015