The 2.0 version of rSNPBase

Variant report

Variant rs1874811
Chromosome Location chr1:220143553-220143554
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220129200-220145800 Weak transcription HepG2 liver
2 chr1:220132200-220144200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:220132800-220177000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:220137200-220145800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:220139200-220145400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr1:220139400-220143600 Weak transcription NHEK skin
7 chr1:220139400-220146000 Weak transcription Colon Smooth Muscle Colon
8 chr1:220139400-220154000 Weak transcription Fetal Lung lung
9 chr1:220139600-220143600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:220139600-220144600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:220139800-220143600 Weak transcription Fetal Brain Female brain
12 chr1:220140000-220144400 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:220140000-220146000 Weak transcription Psoas Muscle Psoas
14 chr1:220140000-220167400 Weak transcription Gastric stomach
15 chr1:220140200-220151800 Weak transcription NHLF lung
16 chr1:220140200-220157600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:220140200-220160000 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr1:220140400-220144200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:220140400-220146000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:220140400-220154200 Weak transcription Esophagus oesophagus
21 chr1:220140600-220143600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:220140600-220144600 Weak transcription A549 lung
23 chr1:220140600-220146000 Weak transcription Brain Angular Gyrus brain
24 chr1:220140600-220146200 Weak transcription Spleen Spleen
25 chr1:220140600-220162400 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr1:220140600-220162400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:220140600-220163000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:220140800-220143800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:220140800-220144000 Strong transcription Lung lung
30 chr1:220140800-220144200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:220140800-220144200 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:220140800-220144200 Strong transcription Fetal Muscle Trunk muscle
33 chr1:220140800-220144200 Strong transcription Fetal Stomach stomach
34 chr1:220140800-220144400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:220140800-220146800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:220140800-220146800 Weak transcription Fetal Heart heart
37 chr1:220140800-220147000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:220140800-220150000 Strong transcription Sigmoid Colon Sigmoid Colon
39 chr1:220140800-220150800 Strong transcription Left Ventricle heart
40 chr1:220140800-220161800 Strong transcription Fetal Thymus thymus
41 chr1:220140800-220162400 Strong transcription Fetal Intestine Large intestine
42 chr1:220140800-220162400 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr1:220140800-220163200 Strong transcription Primary T cells from cord blood blood
44 chr1:220140800-220164000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:220140800-220173400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:220140800-220192400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr1:220141000-220143600 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:220141000-220143800 Strong transcription K562 blood
49 chr1:220141000-220144000 Strong transcription Fetal Muscle Leg muscle
50 chr1:220141000-220146400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015