The 2.0 version of rSNPBase

Variant report

Variant rs12409750
Chromosome Location chr1:220138518-220138519
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220129200-220145800 Weak transcription HepG2 liver
2 chr1:220132000-220138800 Weak transcription Aorta Aorta
3 chr1:220132200-220144200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:220132400-220143200 Weak transcription Colonic Mucosa Colon
5 chr1:220132800-220141000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:220132800-220177000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:220133000-220141200 Weak transcription Duodenum Mucosa Duodenum
8 chr1:220133400-220138600 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr1:220133600-220140800 Weak transcription Fetal Intestine Large intestine
10 chr1:220133600-220141000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:220133600-220142200 Weak transcription Small Intestine intestine
12 chr1:220137200-220145800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:220137400-220140800 Weak transcription Lung lung
14 chr1:220137400-220142000 Weak transcription Pancreas Pancrea
15 chr1:220137600-220142200 Weak transcription Primary B cells from cord blood blood
16 chr1:220137800-220140200 Enhancers K562 blood
17 chr1:220138000-220139200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr1:220138000-220140800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:220138000-220141000 Weak transcription Liver Liver
20 chr1:220138000-220141400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:220138000-220141400 Weak transcription HUVEC blood vessel
22 chr1:220138200-220140800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:220138200-220140800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:220138400-220141000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:220138400-220141000 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015