Variant report

Variant	rs11130258
Chromosome Location	chr3:50833564-50833565
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs1038415	0.83[AMR][1000 genomes]
rs11923336	0.83[AMR][1000 genomes]
rs13092850	0.83[AMR][1000 genomes]
rs13325937	0.83[AMR][1000 genomes]
rs1552255	0.83[AMR][1000 genomes]
rs1843073	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2129069	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2262848	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2355337	0.83[AMR][1000 genomes]
rs2355701	0.83[AMR][1000 genomes]
rs2459450	0.83[AMR][1000 genomes]
rs2608994	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2608996	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2609004	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2609014	0.83[AMR][1000 genomes]
rs2609015	0.83[AMR][1000 genomes]
rs2609027	0.83[AMR][1000 genomes]
rs2609030	0.83[AMR][1000 genomes]
rs2675775	0.83[AMR][1000 genomes]
rs2675781	0.83[AMR][1000 genomes]
rs2675785	0.83[AMR][1000 genomes]
rs2675797	0.83[AMR][1000 genomes]
rs2675798	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2675815	0.83[AMR][1000 genomes]
rs2675823	0.83[AMR][1000 genomes]
rs2675824	0.83[AMR][1000 genomes]
rs2675826	0.83[AMR][1000 genomes]
rs2675833	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs407164	0.83[AMR][1000 genomes]
rs421689	0.83[AMR][1000 genomes]
rs4234694	0.83[AMR][1000 genomes]
rs4234695	0.83[AMR][1000 genomes]
rs4340700	0.83[AMR][1000 genomes]
rs4401355	0.83[AMR][1000 genomes]
rs4423762	0.83[AMR][1000 genomes]
rs4440121	0.83[AMR][1000 genomes]
rs4688675	0.83[AMR][1000 genomes]
rs4688704	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs57756789	0.83[AMR][1000 genomes]
rs60132317	0.81[AFR][1000 genomes]
rs60455882	0.83[AMR][1000 genomes]
rs621975	0.83[AMR][1000 genomes]
rs628865	0.83[AMR][1000 genomes]
rs6446223	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6446242	0.83[AMR][1000 genomes]
rs6446244	0.83[AMR][1000 genomes]
rs6446246	0.83[AMR][1000 genomes]
rs650473	0.83[AMR][1000 genomes]
rs6807662	0.83[AMR][1000 genomes]
rs7373700	0.83[AMR][1000 genomes]
rs73833251	0.83[AMR][1000 genomes]
rs7433944	0.83[AMR][1000 genomes]
rs7650772	0.83[AMR][1000 genomes]
rs7653228	0.83[AMR][1000 genomes]
rs936714	0.83[AMR][1000 genomes]
rs9818443	0.83[AMR][1000 genomes]
rs9821597	0.83[AMR][1000 genomes]
rs9840476	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs9851304	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs9854588	0.83[AMR][1000 genomes]
rs9857033	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50826400-50834400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:50826400-50841200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr3:50828200-50834000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr3:50828600-50834400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr3:50830200-50834200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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