Variant report

Variant rs407164
Chromosome Location chr3:50654131-50654132
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50650600-50654200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr3:50653000-50654400 Flanking Active TSS Dnd41 blood
3 chr3:50653200-50654400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
4 chr3:50653200-50654400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
5 chr3:50653400-50654200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
6 chr3:50653400-50654200 Flanking Active TSS Brain Hippocampus Middle brain
7 chr3:50653400-50654200 Flanking Active TSS Thymus Thymus
8 chr3:50653400-50654200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr3:50653400-50654400 Flanking Active TSS Primary B cells from cord blood blood
10 chr3:50653400-50654400 Flanking Active TSS Primary T cells fromperipheralblood blood
11 chr3:50653400-50654400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
12 chr3:50653400-50654400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:50653400-50654400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
14 chr3:50653400-50654400 Flanking Active TSS Fetal Muscle Trunk muscle
15 chr3:50653400-50654400 Flanking Active TSS Stomach Smooth Muscle stomach
16 chr3:50653400-50655000 Active TSS Placenta Amnion Placenta Amnion
17 chr3:50653600-50654200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:50653600-50654200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr3:50653600-50654200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr3:50653600-50654200 Flanking Active TSS Primary monocytes fromperipheralblood blood
21 chr3:50653600-50654200 Flanking Active TSS Primary B cells from peripheral blood blood
22 chr3:50653600-50654200 Flanking Active TSS Primary T cells from cord blood blood
23 chr3:50653600-50654200 Flanking Active TSS Primary hematopoietic stem cells blood
24 chr3:50653600-50654200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
25 chr3:50653600-50654200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
26 chr3:50653600-50654200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
27 chr3:50653600-50654200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
28 chr3:50653600-50654200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
29 chr3:50653600-50654200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
30 chr3:50653600-50654200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr3:50653600-50654200 Flanking Active TSS Brain Anterior Caudate brain
32 chr3:50653600-50654200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
33 chr3:50653600-50654200 Flanking Active TSS Duodenum Mucosa Duodenum
34 chr3:50653600-50654200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
35 chr3:50653600-50654200 Flanking Active TSS Fetal Intestine Large intestine
36 chr3:50653600-50654200 Flanking Active TSS Fetal Intestine Small intestine
37 chr3:50653600-50654200 Flanking Active TSS Fetal Kidney kidney
38 chr3:50653600-50654200 Flanking Active TSS Fetal Stomach stomach
39 chr3:50653600-50654200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
40 chr3:50653600-50654200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
41 chr3:50653600-50654200 Flanking Active TSS GM12878-XiMat blood
42 chr3:50653600-50654200 Flanking Active TSS HSMM muscle
43 chr3:50653600-50654200 Flanking Active TSS NHEK skin
44 chr3:50653600-50654200 Flanking Active TSS NHLF lung
45 chr3:50653600-50654400 Active TSS ES-I3 Cell Line embryonic stem cell
46 chr3:50653600-50654400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
47 chr3:50653600-50654400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
48 chr3:50653600-50654400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr3:50653600-50654400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr3:50653600-50654400 Flanking Active TSS Muscle Satellite Cultured Cells --

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