Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:112858644..112861642-chr10:112871139..112872875,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10160191	0.84[EUR][1000 genomes]
rs10466194	0.82[EUR][1000 genomes]
rs10885092	0.86[EUR][1000 genomes]
rs10885095	0.82[EUR][1000 genomes]
rs10885096	0.82[EUR][1000 genomes]
rs11195434	0.82[EUR][1000 genomes]
rs11195441	0.84[EUR][1000 genomes]
rs12245104	0.96[ASN][1000 genomes]
rs12248211	0.82[EUR][1000 genomes]
rs12262597	0.84[EUR][1000 genomes]
rs12263061	0.82[EUR][1000 genomes]
rs12267010	0.84[EUR][1000 genomes]
rs12571958	0.82[EUR][1000 genomes]
rs12573370	0.84[EUR][1000 genomes]
rs1335707	0.84[EUR][1000 genomes]
rs1360862	0.90[ASN][1000 genomes]
rs17128415	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17128427	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17128431	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56321879	0.86[EUR][1000 genomes]
rs68077731	0.84[EUR][1000 genomes]
rs68106015	0.82[EUR][1000 genomes]
rs72641329	0.82[EUR][1000 genomes]
rs72641330	0.84[EUR][1000 genomes]
rs870831	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs945336	0.82[EUR][1000 genomes]
rs954385	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498045	chr10:112794518-113353550	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	esv1796336	chr10:112848721-112878724	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112864200-112871800	Weak transcription	Colonic Mucosa	Colon
2	chr10:112865200-112872000	Weak transcription	Fetal Intestine Small	intestine
3	chr10:112868400-112872600	Weak transcription	Gastric	stomach
4	chr10:112869600-112873600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr10:112869800-112871800	Weak transcription	Stomach Mucosa	stomach
6	chr10:112869800-112872200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr10:112869800-112872200	Enhancers	Fetal Brain Male	brain
8	chr10:112870400-112871800	Weak transcription	Pancreas	Pancrea
9	chr10:112871200-112872200	Enhancers	Duodenum Mucosa	Duodenum
10	chr10:112871400-112872000	Weak transcription	Spleen	Spleen

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