Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:112886782..112889479-chr10:112895290..112897533,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10160191	0.87[EUR][1000 genomes]
rs10466194	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10885092	0.85[EUR][1000 genomes]
rs10885095	0.88[EUR][1000 genomes]
rs10885096	0.88[EUR][1000 genomes]
rs11195427	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11195434	0.88[EUR][1000 genomes]
rs11195441	0.87[EUR][1000 genomes]
rs12245104	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12248211	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12262597	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12263061	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12267010	0.87[EUR][1000 genomes]
rs12571958	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12573370	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1335707	0.87[EUR][1000 genomes]
rs1360862	0.94[ASN][1000 genomes]
rs17128415	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17128427	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17128431	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56321879	0.85[EUR][1000 genomes]
rs68077731	0.87[EUR][1000 genomes]
rs68106015	0.88[EUR][1000 genomes]
rs72641329	0.88[EUR][1000 genomes]
rs72641330	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72641331	0.82[EUR][1000 genomes]
rs945336	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs954385	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498045	chr10:112794518-113353550	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112872600-112889200	Weak transcription	Pancreas	Pancrea
2	chr10:112878000-112887800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr10:112881200-112888200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr10:112882400-112889000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr10:112885400-112888800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:112886000-112889600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr10:112886000-112889600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr10:112886400-112888800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr10:112886400-112888800	Weak transcription	NHDF-Ad	bronchial
10	chr10:112886600-112888200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr10:112886800-112887800	Weak transcription	Primary hematopoietic stem cells	blood
12	chr10:112886800-112888800	Enhancers	K562	blood
13	chr10:112887200-112888200	Weak transcription	Stomach Mucosa	stomach
14	chr10:112887400-112891200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
15	chr10:112887600-112889200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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