Variant report
| Variant | rs11197425 |
|---|---|
| Chromosome Location | chr10:117487693-117487694 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:117479183..117481375-chr10:117486927..117488986,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:37)
| rs_ID | r2[population] |
|---|---|
| rs11814391 | 1.00[AMR][1000 genomes] |
| rs11815570 | 1.00[AMR][1000 genomes] |
| rs11819600 | 1.00[AMR][1000 genomes] |
| rs12242852 | 1.00[AMR][1000 genomes] |
| rs12244147 | 1.00[AMR][1000 genomes] |
| rs12245971 | 0.85[AFR][1000 genomes] |
| rs12246558 | 0.96[AFR][1000 genomes] |
| rs12250994 | 0.96[AFR][1000 genomes] |
| rs12251850 | 1.00[AMR][1000 genomes] |
| rs12251879 | 1.00[AMR][1000 genomes] |
| rs12253441 | 1.00[AMR][1000 genomes] |
| rs12254907 | 0.96[AFR][1000 genomes] |
| rs12255338 | 1.00[AMR][1000 genomes] |
| rs12256657 | 0.92[AFR][1000 genomes] |
| rs12257990 | 0.85[AFR][1000 genomes] |
| rs12258177 | 1.00[AMR][1000 genomes] |
| rs12258300 | 0.96[AFR][1000 genomes] |
| rs12258619 | 0.81[AFR][1000 genomes] |
| rs12262485 | 1.00[AMR][1000 genomes] |
| rs12262493 | 1.00[AMR][1000 genomes] |
| rs12264068 | 0.88[AFR][1000 genomes] |
| rs12269265 | 1.00[AMR][1000 genomes] |
| rs13377136 | 0.92[AFR][1000 genomes] |
| rs56364264 | 1.00[AMR][1000 genomes] |
| rs56379384 | 1.00[AMR][1000 genomes] |
| rs56389241 | 0.92[AFR][1000 genomes] |
| rs7070325 | 1.00[AMR][1000 genomes] |
| rs7080508 | 1.00[AMR][1000 genomes] |
| rs7095980 | 1.00[AMR][1000 genomes] |
| rs7099966 | 1.00[AMR][1000 genomes] |
| rs74158241 | 1.00[AMR][1000 genomes] |
| rs74158251 | 0.85[AFR][1000 genomes] |
| rs74158258 | 0.85[AFR][1000 genomes] |
| rs74158274 | 1.00[AMR][1000 genomes] |
| rs74158276 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74158277 | 1.00[AMR][1000 genomes] |
| rs74160703 | 0.85[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117471000-117490600 | Weak transcription | Aorta | Aorta |
