Variant report

Variant	rs11236749
Chromosome Location	chr11:76137864-76137865
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:76135625..76138105-chr11:76141929..76143509,2	K562	blood:
2	chr11:76132118..76140418-chr11:76149873..76158428,11	K562	blood:
3	chr11:76136746..76139219-chr11:76154481..76156292,2	MCF-7	breast:
4	chr11:76137230..76138839-chr11:76139642..76142020,2	K562	blood:
5	chr11:76135965..76138472-chr11:76155761..76158428,2	K562	blood:

Variant related genes	Relation type
ENSG00000255135	Chromatin interaction
ENSG00000158636	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10793167	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10793169	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10793171	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10899217	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10899219	0.86[AFR][1000 genomes]
rs10899220	0.84[AFR][1000 genomes]
rs10899222	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10899225	0.96[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10899227	0.82[EUR][1000 genomes]
rs11236752	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11606394	0.85[AFR][1000 genomes]
rs2508740	0.84[EUR][1000 genomes]
rs2508741	0.84[EUR][1000 genomes]
rs2508753	0.85[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs2508760	0.93[AFR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2508761	0.84[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2508762	0.84[EUR][1000 genomes]
rs2513505	0.88[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs2513515	0.84[AFR][1000 genomes]
rs2513520	0.93[AFR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3016373	0.83[AFR][1000 genomes]
rs3814711	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4245443	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4272809	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4300410	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4625500	0.86[AFR][1000 genomes]
rs4945087	0.85[AFR][1000 genomes]
rs4945090	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs5023625	0.96[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6592635	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7106564	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7107058	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7109548	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7926009	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7927515	0.80[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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