The 2.0 version of rSNPBase

Variant report

Variant rs11543435
Chromosome Location chr12:45788934-45788935
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:45744800-45809200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr12:45752200-45803800 Weak transcription Rectal Smooth Muscle rectum
3 chr12:45752200-45809200 Weak transcription Small Intestine intestine
4 chr12:45759000-45805200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr12:45759200-45822600 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr12:45759400-45796200 Weak transcription Brain Hippocampus Middle brain
7 chr12:45760600-45798000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr12:45763400-45796000 Weak transcription Osteobl bone
9 chr12:45764400-45802800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr12:45764400-45821000 Weak transcription Brain Cingulate Gyrus brain
11 chr12:45764600-45815400 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr12:45772600-45815400 Weak transcription K562 blood
13 chr12:45773400-45803800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr12:45773600-45795600 Weak transcription Hela-S3 cervix
15 chr12:45774200-45794800 Weak transcription NHDF-Ad bronchial
16 chr12:45774800-45811400 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr12:45777200-45795600 Weak transcription Primary B cells from peripheral blood blood
18 chr12:45778000-45795800 Weak transcription NH-A brain
19 chr12:45778800-45803400 Weak transcription Muscle Satellite Cultured Cells --
20 chr12:45779400-45794400 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr12:45780400-45794400 Weak transcription Fetal Heart heart
22 chr12:45780400-45795400 Weak transcription HSMM muscle
23 chr12:45780400-45796800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr12:45780400-45829800 Weak transcription Brain Anterior Caudate brain
25 chr12:45780600-45794600 Weak transcription HMEC breast
26 chr12:45780600-45795600 Weak transcription HSMMtube muscle
27 chr12:45780800-45795600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr12:45780800-45802000 Weak transcription Right Ventricle heart
29 chr12:45782400-45794600 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr12:45782400-45795600 Weak transcription Fetal Kidney kidney
31 chr12:45782400-45797200 Weak transcription Aorta Aorta
32 chr12:45783200-45818800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr12:45783400-45826400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr12:45783600-45799800 Weak transcription HepG2 liver
35 chr12:45784000-45795600 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr12:45784800-45794600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr12:45784800-45795200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr12:45784800-45795600 Weak transcription NHEK skin
39 chr12:45784800-45795800 Weak transcription Colon Smooth Muscle Colon
40 chr12:45785200-45795600 Weak transcription HUVEC blood vessel
41 chr12:45785600-45794200 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr12:45785600-45795600 Weak transcription NHLF lung
43 chr12:45785600-45796400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr12:45785800-45789400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr12:45785800-45794000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr12:45786000-45792800 Weak transcription Placenta Placenta
47 chr12:45786000-45794400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr12:45786000-45797200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr12:45786000-45799800 Weak transcription Primary hematopoietic stem cells blood
50 chr12:45786000-45800800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015