Variant report
| Variant | rs58640880 |
|---|---|
| Chromosome Location | chr12:45804700-45804701 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:45744800-45809200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr12:45752200-45809200 | Weak transcription | Small Intestine | intestine |
| 3 | chr12:45759000-45805200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 4 | chr12:45759200-45822600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 5 | chr12:45764400-45821000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 6 | chr12:45764600-45815400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 7 | chr12:45772600-45815400 | Weak transcription | K562 | blood |
| 8 | chr12:45774800-45811400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 9 | chr12:45780400-45829800 | Weak transcription | Brain Anterior Caudate | brain |
| 10 | chr12:45783200-45818800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 11 | chr12:45783400-45826400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 12 | chr12:45786200-45805400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 13 | chr12:45786200-45806200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 14 | chr12:45786200-45809200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr12:45786400-45806200 | Weak transcription | Esophagus | oesophagus |
| 16 | chr12:45786600-45806000 | Weak transcription | Ovary | ovary |
| 17 | chr12:45786600-45827000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr12:45792000-45828600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 19 | chr12:45792600-45822600 | Weak transcription | Colonic Mucosa | Colon |
| 20 | chr12:45792600-45827000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 21 | chr12:45792800-45811800 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 22 | chr12:45793000-45827600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 23 | chr12:45794200-45807400 | Strong transcription | A549 | lung |
| 24 | chr12:45794200-45823200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 25 | chr12:45794400-45807400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 26 | chr12:45794600-45806800 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 27 | chr12:45794600-45809200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 28 | chr12:45794600-45812200 | Weak transcription | Fetal Brain Male | brain |
| 29 | chr12:45794800-45807600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 30 | chr12:45795000-45812200 | Weak transcription | Fetal Brain Female | brain |
| 31 | chr12:45795200-45808000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr12:45795200-45813200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr12:45795200-45817800 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 34 | chr12:45795400-45813400 | Strong transcription | Dnd41 | blood |
| 35 | chr12:45795600-45807000 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 36 | chr12:45795600-45807600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 37 | chr12:45795600-45825600 | Strong transcription | Fetal Intestine Large | intestine |
| 38 | chr12:45795800-45806800 | Strong transcription | Placenta | Placenta |
| 39 | chr12:45795800-45808200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr12:45796000-45807400 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 41 | chr12:45796000-45812400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 42 | chr12:45796400-45812200 | Weak transcription | Hela-S3 | cervix |
| 43 | chr12:45796400-45829600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 44 | chr12:45796600-45808000 | Strong transcription | GM12878-XiMat | blood |
| 45 | chr12:45796600-45828400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 46 | chr12:45796600-45828600 | Weak transcription | Brain Substantia Nigra | brain |
| 47 | chr12:45796600-45828800 | Weak transcription | Brain Angular Gyrus | brain |
| 48 | chr12:45797600-45805400 | Weak transcription | Aorta | Aorta |
| 49 | chr12:45797600-45819200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 50 | chr12:45798600-45806600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
