The 2.0 version of rSNPBase

Variant report

Variant rs73281553
Chromosome Location chr12:45780586-45780587
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:45725800-45782000 Weak transcription Brain Angular Gyrus brain
2 chr12:45744800-45809200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr12:45745600-45785600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr12:45752200-45803800 Weak transcription Rectal Smooth Muscle rectum
5 chr12:45752200-45809200 Weak transcription Small Intestine intestine
6 chr12:45759000-45805200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr12:45759200-45822600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr12:45759400-45796200 Weak transcription Brain Hippocampus Middle brain
9 chr12:45760200-45785600 Weak transcription Esophagus oesophagus
10 chr12:45760600-45785800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr12:45760600-45798000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr12:45763400-45796000 Weak transcription Osteobl bone
13 chr12:45764400-45782400 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr12:45764400-45802800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr12:45764400-45821000 Weak transcription Brain Cingulate Gyrus brain
16 chr12:45764600-45785600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr12:45764600-45815400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr12:45770800-45780600 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr12:45771200-45781400 Strong transcription Primary B cells from cord blood blood
20 chr12:45771200-45785000 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr12:45771200-45785400 Strong transcription Fetal Thymus thymus
22 chr12:45771200-45785800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr12:45771200-45786600 Strong transcription Dnd41 blood
24 chr12:45771200-45787000 Strong transcription Adipose Nuclei Adipose
25 chr12:45771200-45787000 Strong transcription Skeletal Muscle Female skeletal muscle
26 chr12:45771200-45787200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:45771400-45781000 Strong transcription Liver Liver
28 chr12:45771400-45785400 Strong transcription Primary monocytes fromperipheralblood blood
29 chr12:45771400-45786600 Strong transcription Primary T cells fromperipheralblood blood
30 chr12:45771600-45780600 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr12:45771800-45782200 Strong transcription Skeletal Muscle Male skeletal muscle
32 chr12:45772000-45780800 Strong transcription Fetal Muscle Trunk muscle
33 chr12:45772000-45781600 Strong transcription Fetal Intestine Large intestine
34 chr12:45772200-45782400 Strong transcription Fetal Muscle Leg muscle
35 chr12:45772200-45782600 Strong transcription Primary T cells from cord blood blood
36 chr12:45772600-45785400 Weak transcription H9 Cell Line embryonic stem cell
37 chr12:45772600-45815400 Weak transcription K562 blood
38 chr12:45773200-45782200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr12:45773400-45803800 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr12:45773600-45795600 Weak transcription Hela-S3 cervix
41 chr12:45774000-45780600 Strong transcription Ovary ovary
42 chr12:45774000-45780800 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr12:45774200-45786600 Strong transcription Left Ventricle heart
44 chr12:45774200-45794800 Weak transcription NHDF-Ad bronchial
45 chr12:45774800-45811400 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr12:45775200-45780600 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr12:45775200-45782800 Strong transcription Duodenum Mucosa Duodenum
48 chr12:45775400-45780800 Strong transcription NHEK skin
49 chr12:45775600-45780800 Strong transcription Fetal Lung lung
50 chr12:45775600-45783600 Strong transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015