The 2.0 version of rSNPBase

Variant report

Variant rs73283340
Chromosome Location chr12:45827120-45827121
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:45780400-45829800 Weak transcription Brain Anterior Caudate brain
2 chr12:45792000-45828600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr12:45793000-45827600 Strong transcription Primary monocytes fromperipheralblood blood
4 chr12:45796400-45829600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr12:45796600-45828400 Weak transcription Brain Inferior Temporal Lobe brain
6 chr12:45796600-45828600 Weak transcription Brain Substantia Nigra brain
7 chr12:45796600-45828800 Weak transcription Brain Angular Gyrus brain
8 chr12:45804400-45828000 Weak transcription Brain Hippocampus Middle brain
9 chr12:45804400-45830200 Weak transcription Brain Germinal Matrix brain
10 chr12:45806800-45829800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr12:45811600-45829400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr12:45812600-45832000 Weak transcription Small Intestine intestine
13 chr12:45813000-45829600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr12:45816400-45828200 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr12:45817400-45828800 Weak transcription NHEK skin
16 chr12:45817800-45829200 Weak transcription Psoas Muscle Psoas
17 chr12:45818000-45828600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr12:45819400-45827600 Strong transcription Liver Liver
19 chr12:45819600-45830000 Weak transcription GM12878-XiMat blood
20 chr12:45820000-45828000 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr12:45821200-45829200 Weak transcription Right Atrium heart
22 chr12:45821200-45829400 Weak transcription NHLF lung
23 chr12:45821200-45829800 Weak transcription Fetal Heart heart
24 chr12:45821200-45833000 Weak transcription NH-A brain
25 chr12:45822000-45828000 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr12:45822200-45828000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr12:45823000-45829000 Weak transcription Rectal Smooth Muscle rectum
28 chr12:45823200-45829800 Weak transcription Fetal Lung lung
29 chr12:45824200-45829800 Weak transcription Osteobl bone
30 chr12:45824200-45832800 Weak transcription Muscle Satellite Cultured Cells --
31 chr12:45824600-45829400 Weak transcription HMEC breast
32 chr12:45824800-45828400 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr12:45824800-45833000 Weak transcription NHDF-Ad bronchial
34 chr12:45825000-45827200 Weak transcription Fetal Stomach stomach
35 chr12:45825400-45827200 Weak transcription Placenta Placenta
36 chr12:45825400-45830000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr12:45825600-45827200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:45825600-45827200 Weak transcription Fetal Muscle Leg muscle
39 chr12:45825600-45827200 Weak transcription A549 lung
40 chr12:45825600-45828000 Weak transcription K562 blood
41 chr12:45825600-45828400 Weak transcription Fetal Intestine Large intestine
42 chr12:45825600-45828600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr12:45825600-45829200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr12:45825600-45829200 Weak transcription Spleen Spleen
45 chr12:45825600-45829400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr12:45825600-45829800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr12:45825600-45829800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr12:45825600-45830000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr12:45825600-45830000 Weak transcription Stomach Smooth Muscle stomach
50 chr12:45825600-45831800 Weak transcription Lung lung

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Last update: Aug 31, 2015