The 2.0 version of rSNPBase

Variant report

Variant rs58337263
Chromosome Location chr12:45829341-45829342
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:45780400-45829800 Weak transcription Brain Anterior Caudate brain
2 chr12:45796400-45829600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr12:45804400-45830200 Weak transcription Brain Germinal Matrix brain
4 chr12:45806800-45829800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr12:45811600-45829400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr12:45812600-45832000 Weak transcription Small Intestine intestine
7 chr12:45813000-45829600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr12:45819600-45830000 Weak transcription GM12878-XiMat blood
9 chr12:45821200-45829400 Weak transcription NHLF lung
10 chr12:45821200-45829800 Weak transcription Fetal Heart heart
11 chr12:45821200-45833000 Weak transcription NH-A brain
12 chr12:45823200-45829800 Weak transcription Fetal Lung lung
13 chr12:45824200-45829800 Weak transcription Osteobl bone
14 chr12:45824200-45832800 Weak transcription Muscle Satellite Cultured Cells --
15 chr12:45824600-45829400 Weak transcription HMEC breast
16 chr12:45824800-45833000 Weak transcription NHDF-Ad bronchial
17 chr12:45825400-45830000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr12:45825600-45829400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr12:45825600-45829800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr12:45825600-45829800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr12:45825600-45830000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr12:45825600-45830000 Weak transcription Stomach Smooth Muscle stomach
23 chr12:45825600-45831800 Weak transcription Lung lung
24 chr12:45825600-45831800 Weak transcription Ovary ovary
25 chr12:45825600-45835800 Weak transcription Colon Smooth Muscle Colon
26 chr12:45826000-45829400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr12:45826200-45830000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr12:45826200-45832800 Weak transcription HSMM muscle
29 chr12:45826400-45830400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr12:45827200-45829800 Weak transcription Right Ventricle heart
31 chr12:45827400-45829400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr12:45827400-45829600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr12:45827400-45829600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr12:45827600-45829400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr12:45827600-45829400 Weak transcription Primary hematopoietic stem cells blood
36 chr12:45827600-45829600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr12:45827600-45830000 Weak transcription Liver Liver
38 chr12:45827600-45830200 Weak transcription Fetal Stomach stomach
39 chr12:45827600-45830600 Weak transcription Gastric stomach
40 chr12:45827600-45832800 Weak transcription Pancreas Pancrea
41 chr12:45827600-45834800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr12:45827600-45842800 Weak transcription Aorta Aorta
43 chr12:45827800-45829600 Weak transcription Dnd41 blood
44 chr12:45828000-45829600 Enhancers Brain Hippocampus Middle brain
45 chr12:45828000-45829600 Weak transcription Duodenum Mucosa Duodenum
46 chr12:45828000-45830000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr12:45828000-45830000 Enhancers iPS-18 Cell Line embryonic stem cell
48 chr12:45828000-45830000 Enhancers Cortex derived primary cultured neurospheres brain
49 chr12:45828000-45830000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr12:45828000-45830200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015