Variant report

Variant	rs73283357
Chromosome Location	chr12:45831598-45831599
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:45826943..45829622-chr12:45831325..45834835,3	MCF-7	breast:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs11183016	1.00[AMR][1000 genomes]
rs57266792	0.80[AFR][1000 genomes]
rs58337263	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59030619	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59846961	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59899152	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60534803	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61471266	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73279690	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73279696	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73279698	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73279700	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281450	0.80[AFR][1000 genomes]
rs73281506	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281507	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281508	1.00[AMR][1000 genomes]
rs73281510	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281512	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281519	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281526	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281536	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281545	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281549	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281553	0.88[AFR][1000 genomes]
rs73281555	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281565	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281566	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281571	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281577	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281581	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281585	0.88[AFR][1000 genomes]
rs73281588	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281594	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281599	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73281602	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283310	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283315	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283320	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283323	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283338	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283340	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283345	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283347	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283352	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283355	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:45812600-45832000	Weak transcription	Small Intestine	intestine
2	chr12:45821200-45833000	Weak transcription	NH-A	brain
3	chr12:45824200-45832800	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr12:45824800-45833000	Weak transcription	NHDF-Ad	bronchial
5	chr12:45825600-45831800	Weak transcription	Lung	lung
6	chr12:45825600-45831800	Weak transcription	Ovary	ovary
7	chr12:45825600-45835800	Weak transcription	Colon Smooth Muscle	Colon
8	chr12:45826200-45832800	Weak transcription	HSMM	muscle
9	chr12:45827600-45832800	Weak transcription	Pancreas	Pancrea
10	chr12:45827600-45834800	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr12:45827600-45842800	Weak transcription	Aorta	Aorta
12	chr12:45828000-45841800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr12:45828400-45835400	Weak transcription	Adipose Nuclei	Adipose
14	chr12:45830000-45832600	Weak transcription	Right Atrium	heart
15	chr12:45830000-45833600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr12:45830200-45832800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr12:45830400-45832800	Weak transcription	Osteobl	bone

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