Variant report

Variant	rs11593648
Chromosome Location	chr10:38290524-38290525
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:38290515..38293236-chr10:38297788..38299800,3	K562	blood:

Variant related genes	Relation type
ENSG00000189180	Chromatin interaction

Extended variants
information (count: 288 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:281)

rs_ID	r²[population]
rs10508862	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1148272	0.83[EUR][1000 genomes]
rs1148273	0.83[EUR][1000 genomes]
rs1148274	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148275	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148276	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148277	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148278	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148279	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148280	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148281	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1148282	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148283	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1148284	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148285	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148286	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148288	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148289	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148290	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148291	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148292	0.83[AMR][1000 genomes]
rs1148293	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148294	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1148295	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148296	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1148297	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11593864	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11594192	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11594193	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11594576	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11595211	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11595912	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11595951	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11597265	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11597703	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11597806	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11598302	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1208549	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1208550	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208551	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208553	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208557	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208558	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1208561	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1208562	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208563	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208564	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208565	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208566	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208567	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208568	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208569	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208571	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208574	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208577	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208579	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208581	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208583	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208584	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208585	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208586	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208589	0.82[EUR][1000 genomes]
rs1208590	0.80[EUR][1000 genomes]
rs1208593	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208594	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208598	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208599	0.86[AMR][1000 genomes]
rs1208600	0.81[AMR][1000 genomes]
rs1208602	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208604	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208605	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208606	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208610	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208611	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1208612	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208613	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208614	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208615	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1208616	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1208617	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1208618	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1208620	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208622	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208623	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208624	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208625	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208626	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208628	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208629	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208631	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208632	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208634	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208635	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208636	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208639	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208642	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208644	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208646	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1208647	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208648	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208649	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208650	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208651	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208652	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208655	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208656	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208657	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1208659	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208660	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208661	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208662	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208664	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208665	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1208666	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208667	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208668	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1208669	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208670	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208671	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208672	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208673	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208674	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1208676	0.83[EUR][1000 genomes]
rs1208677	0.83[EUR][1000 genomes]
rs1208678	0.83[EUR][1000 genomes]
rs1208679	0.83[EUR][1000 genomes]
rs1208680	0.83[EUR][1000 genomes]
rs1208682	0.83[EUR][1000 genomes]
rs1208685	0.83[EUR][1000 genomes]
rs1208686	0.85[EUR][1000 genomes]
rs1208687	0.85[EUR][1000 genomes]
rs1208688	0.85[EUR][1000 genomes]
rs1208690	0.85[EUR][1000 genomes]
rs1208692	0.85[EUR][1000 genomes]
rs1208693	0.85[EUR][1000 genomes]
rs1208694	0.85[EUR][1000 genomes]
rs1208696	0.81[EUR][1000 genomes]
rs1208698	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208699	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208701	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208702	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208703	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208704	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1208705	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208706	0.83[EUR][1000 genomes]
rs1208707	0.83[EUR][1000 genomes]
rs1208709	0.83[EUR][1000 genomes]
rs1208710	0.83[EUR][1000 genomes]
rs1208711	0.83[EUR][1000 genomes]
rs1208712	0.83[EUR][1000 genomes]
rs1208715	0.83[EUR][1000 genomes]
rs1208717	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208718	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208719	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208720	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208721	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208722	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208723	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208724	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208725	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208726	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208727	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208728	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208729	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208730	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1208731	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1208763	0.82[EUR][1000 genomes]
rs1208776	0.83[EUR][1000 genomes]
rs1208777	0.83[EUR][1000 genomes]
rs1208778	0.83[EUR][1000 genomes]
rs1209424	0.85[EUR][1000 genomes]
rs1209748	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1210991	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1211000	0.83[EUR][1000 genomes]
rs1211422	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1211708	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1211709	0.83[EUR][1000 genomes]
rs1212107	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1592338	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1618829	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1621236	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1629948	0.90[AMR][1000 genomes]
rs1735587	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735591	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735601	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1735610	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735622	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735623	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735624	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735626	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735627	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1735628	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735631	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735634	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735635	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735636	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1735637	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1743811	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1743812	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1743813	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1743814	0.82[EUR][1000 genomes]
rs17586860	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1779018	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779019	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779020	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779021	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779022	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779028	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779029	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779031	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779036	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779061	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779066	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1779072	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779074	0.87[EUR][1000 genomes]
rs1779076	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779078	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1779089	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1779132	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1779144	0.82[EUR][1000 genomes]
rs1779155	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2026112	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2211537	0.93[AMR][1000 genomes]
rs2472156	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2472157	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2472161	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2472162	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2472163	0.97[AMR][1000 genomes]
rs2472164	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2472165	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2472166	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2472167	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2472169	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2474538	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2474541	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2474543	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2474544	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2474546	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2474547	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2474560	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2474578	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2480522	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2480523	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2480524	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2504117	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2504123	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2504124	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2504152	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2504153	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2504154	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2505201	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2505219	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2505221	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2505226	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2505227	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2505228	0.97[AMR][1000 genomes]
rs2505229	0.97[AMR][1000 genomes]
rs2505230	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2505231	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2505234	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2505246	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2505254	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2977832	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2983324	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4934928	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4934929	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs58001845	0.85[EUR][1000 genomes]
rs61735514	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7076726	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7077782	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7089949	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7098578	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73241926	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7393766	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs743100	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs767263	0.83[EUR][1000 genomes]
rs767264	0.83[EUR][1000 genomes]
rs7916515	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs874860	0.83[EUR][1000 genomes]
rs9418318	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9418319	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895030	chr10:37715737-38674609	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv1045684	chr10:37765361-38426204	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv540564	chr10:37765361-38426204	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	nsv1040704	chr10:37940024-38451917	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
5	nsv1051121	chr10:38155991-38426204	Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
6	nsv540565	chr10:38155991-38426204	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
7	nsv534122	chr10:38240258-38356008	ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11593648	ZNF248	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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