Variant report

Variant	rs1148292
Chromosome Location	chr10:38144258-38144259
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 360 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:356)

rs_ID	r²[population]
rs10508860	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs10508862	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148272	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1148273	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1148274	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148275	0.80[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148276	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148277	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148278	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148279	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148280	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs1148281	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs1148282	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148283	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1148284	0.80[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1148285	0.93[AMR][1000 genomes]
rs1148286	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1148288	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1148289	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1148290	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1148291	0.93[AMR][1000 genomes]
rs1148293	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1148294	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1148295	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1148296	0.93[AMR][1000 genomes]
rs1148297	0.93[AMR][1000 genomes]
rs11591935	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11592531	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11592992	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11593389	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11593648	0.83[AMR][1000 genomes]
rs11593864	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11594192	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11594193	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11594576	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11594707	1.00[AFR][1000 genomes]
rs11595211	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11595596	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11595912	1.00[AFR][1000 genomes]
rs11595951	1.00[AFR][1000 genomes]
rs11596009	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11596513	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11597265	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11597703	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11597806	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs11598302	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11599846	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208549	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208550	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208551	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208553	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208557	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208558	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208561	0.87[AMR][1000 genomes]
rs1208562	0.93[AMR][1000 genomes]
rs1208563	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208564	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208565	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208566	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208567	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208568	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208569	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208571	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208574	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208577	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208579	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208581	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208583	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208584	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208585	0.93[AMR][1000 genomes]
rs1208586	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208589	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs1208590	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs1208593	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208594	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208598	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208599	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1208600	0.84[AMR][1000 genomes]
rs1208602	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208604	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208605	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208606	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208610	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208611	0.89[CEU][hapmap];0.93[AMR][1000 genomes]
rs1208612	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208613	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208614	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208615	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1208616	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1208617	0.86[AMR][1000 genomes]
rs1208618	0.90[AMR][1000 genomes]
rs1208620	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208622	0.80[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208623	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208624	0.90[AMR][1000 genomes]
rs1208625	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208626	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208628	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208629	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208631	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208632	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208634	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208635	0.88[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208636	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208639	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208642	0.89[CEU][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208644	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208646	0.86[AMR][1000 genomes]
rs1208647	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208648	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208649	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208650	0.80[CEU][hapmap];1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208651	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208652	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208655	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208656	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208657	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs1208659	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208660	0.89[CEU][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];0.90[AMR][1000 genomes]
rs1208661	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208662	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208664	0.89[CEU][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208665	0.87[AMR][1000 genomes]
rs1208666	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208667	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208668	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1208669	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208670	0.93[AMR][1000 genomes]
rs1208671	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208672	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208673	0.89[CEU][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208674	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1208676	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208677	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208678	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208679	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208680	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208682	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208685	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208686	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208687	0.89[CEU][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208688	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208690	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208691	0.88[CEU][hapmap]
rs1208692	0.80[CEU][hapmap];1.00[AFR][1000 genomes]
rs1208693	0.80[AMR][1000 genomes]
rs1208694	0.88[CEU][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208696	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208698	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs1208699	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208701	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208702	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208703	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208704	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208705	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208706	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208707	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208709	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208710	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208711	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208712	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208715	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208717	0.89[CEU][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208718	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208719	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208720	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208721	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208722	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208723	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208724	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208725	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208726	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208727	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208728	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208729	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208730	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208731	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1208764	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208765	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208766	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208768	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208771	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208772	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208773	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.80[AMR][1000 genomes]
rs1208774	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208776	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208777	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1208778	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1209424	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1209748	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1210991	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1211422	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1211708	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1211709	0.80[AMR][1000 genomes]
rs1212107	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs12783471	1.00[AFR][1000 genomes]
rs1322315	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1322320	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1322321	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1361894	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1419246	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1592338	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1618829	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1620874	1.00[AFR][1000 genomes]
rs1620971	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1621236	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1629948	0.93[AMR][1000 genomes]
rs1735587	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735591	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735601	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1735610	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735622	0.93[AMR][1000 genomes]
rs1735623	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs1735624	0.93[AMR][1000 genomes]
rs1735626	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735627	0.96[AMR][1000 genomes]
rs1735628	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735631	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735634	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735635	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735636	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1735637	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1742229	0.80[AMR][1000 genomes]
rs1742230	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742231	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742232	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742233	1.00[AFR][1000 genomes]
rs1742234	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742236	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742237	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742238	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742240	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1742242	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1743811	0.85[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1743812	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.86[AMR][1000 genomes]
rs1743813	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1743814	0.83[AMR][1000 genomes]
rs17576639	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17576786	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17577243	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17577299	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17586860	0.80[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs17591524	1.00[AFR][1000 genomes]
rs17607259	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17660470	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17660553	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17660785	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17660828	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17660840	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779009	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779018	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779019	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779020	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779021	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779022	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779025	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779028	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779029	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779030	1.00[AFR][1000 genomes]
rs1779031	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779036	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779047	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779048	1.00[AFR][1000 genomes]
rs1779049	0.80[AMR][1000 genomes]
rs1779050	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779051	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779052	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779053	0.80[AMR][1000 genomes]
rs1779061	0.89[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779064	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779065	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779066	0.86[AMR][1000 genomes]
rs1779072	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779076	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779078	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs1779089	0.88[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1779132	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs1779144	0.83[AMR][1000 genomes]
rs1779151	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1779155	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs1830613	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1985654	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs1985655	0.80[AMR][1000 genomes]
rs2026112	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2211537	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2472156	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2472157	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2472161	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2472162	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2472163	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2472164	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2472165	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2472166	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2472167	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2474538	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2474541	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2474543	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2474544	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2474546	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2474547	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2480522	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2480523	0.86[AMR][1000 genomes]
rs2480524	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2504117	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2504123	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2504124	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2504152	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2504153	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2504154	1.00[AFR][1000 genomes]
rs2505201	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505219	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505221	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505226	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505227	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505228	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505229	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505230	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505231	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505234	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2505246	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2505254	0.86[AMR][1000 genomes]
rs2753875	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs2977832	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2983324	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs3117562	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs3117563	1.00[AFR][1000 genomes]
rs4934595	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934596	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934893	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934895	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934904	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934905	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934908	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934909	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934910	1.00[AFR][1000 genomes]
rs4934911	1.00[AFR][1000 genomes]
rs4934913	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4934928	1.00[AFR][1000 genomes]
rs4934929	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs58001845	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs61735514	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs7071116	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs7076726	0.90[AMR][1000 genomes]
rs7077782	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs7089949	0.90[AMR][1000 genomes]
rs7098578	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs7393766	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs743100	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs767263	0.80[AMR][1000 genomes]
rs767264	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs7916515	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs874860	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs9418281	1.00[AFR][1000 genomes]
rs9418285	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs9418318	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs9418319	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895030	chr10:37715737-38674609	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv1045684	chr10:37765361-38426204	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv540564	chr10:37765361-38426204	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	nsv1040704	chr10:37940024-38451917	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs1148292	ZNF25	cis	multi-tissue	Pritchard

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:38123000-38144400	Weak transcription	NHEK	skin
2	chr10:38124000-38144400	Weak transcription	NH-A	brain
3	chr10:38125200-38144400	Weak transcription	Psoas Muscle	Psoas
4	chr10:38125800-38144400	Weak transcription	HMEC	breast
5	chr10:38126600-38145600	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr10:38126800-38144800	Weak transcription	Thymus	Thymus
7	chr10:38127000-38144400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr10:38127000-38144400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr10:38127000-38144400	Weak transcription	HSMMtube	muscle
10	chr10:38127000-38144600	Weak transcription	K562	blood
11	chr10:38127000-38145200	Weak transcription	Gastric	stomach
12	chr10:38127000-38145600	Weak transcription	Colonic Mucosa	Colon
13	chr10:38127200-38144400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr10:38127200-38144400	Weak transcription	Osteobl	bone
15	chr10:38127200-38145800	Weak transcription	Placenta	Placenta
16	chr10:38127400-38144400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr10:38127400-38144400	Weak transcription	Rectal Smooth Muscle	rectum
18	chr10:38127600-38145200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr10:38128000-38144400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr10:38128200-38144400	Weak transcription	Left Ventricle	heart
21	chr10:38128400-38145000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
22	chr10:38128800-38145400	Weak transcription	Primary B cells from cord blood	blood
23	chr10:38132000-38144400	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr10:38132000-38145200	Weak transcription	Aorta	Aorta
25	chr10:38132200-38144600	Weak transcription	Small Intestine	intestine
26	chr10:38132400-38145800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr10:38133200-38144400	Weak transcription	Primary T helper cells fromperipheralblood	blood
28	chr10:38133200-38145200	Weak transcription	Primary T cells fromperipheralblood	blood
29	chr10:38133400-38144400	Weak transcription	Primary B cells from peripheral blood	blood
30	chr10:38133400-38144400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
31	chr10:38133400-38145200	Weak transcription	Fetal Muscle Trunk	muscle
32	chr10:38134400-38144400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr10:38135000-38145600	Weak transcription	Monocytes-CD14+_RO01746	blood
34	chr10:38135200-38144400	Weak transcription	Adipose Nuclei	Adipose
35	chr10:38135600-38144400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr10:38135600-38144400	Weak transcription	Sigmoid Colon	Sigmoid Colon
37	chr10:38135600-38145800	Weak transcription	Esophagus	oesophagus
38	chr10:38135800-38144400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr10:38136000-38145200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr10:38136200-38144600	Weak transcription	Duodenum Mucosa	Duodenum
41	chr10:38137200-38145800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr10:38137600-38144400	Weak transcription	Pancreas	Pancrea
43	chr10:38138000-38144600	Weak transcription	A549	lung
44	chr10:38138200-38145200	Weak transcription	Fetal Thymus	thymus
45	chr10:38138600-38144400	Weak transcription	Fetal Muscle Leg	muscle
46	chr10:38139600-38144400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr10:38139600-38144400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
48	chr10:38140400-38144400	Weak transcription	Right Ventricle	heart
49	chr10:38141800-38144400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
50	chr10:38142400-38144400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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