Variant report

Variant rs1208723
Chromosome Location chr10:38116166-38116167
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:38103800-38118000 Weak transcription Brain Cingulate Gyrus brain
2 chr10:38109600-38116200 Weak transcription Rectal Smooth Muscle rectum
3 chr10:38111200-38117200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr10:38111200-38118400 Weak transcription HepG2 liver
5 chr10:38112000-38116600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr10:38112200-38116400 Weak transcription Fetal Brain Male brain
7 chr10:38112800-38116600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr10:38113000-38116400 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr10:38113000-38116600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr10:38113200-38116200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr10:38113200-38116400 Weak transcription Brain Anterior Caudate brain
12 chr10:38113200-38117400 Weak transcription Fetal Heart heart
13 chr10:38113200-38118000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr10:38113600-38116200 Weak transcription Fetal Kidney kidney
15 chr10:38113600-38116800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr10:38113600-38117800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr10:38113600-38118000 Weak transcription Brain Substantia Nigra brain
18 chr10:38114000-38116600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr10:38114000-38118800 Weak transcription HSMMtube muscle
20 chr10:38114000-38128800 ZNF genes & repeats Liver Liver
21 chr10:38114200-38117200 Weak transcription Dnd41 blood
22 chr10:38114200-38119000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr10:38114400-38123600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
24 chr10:38114400-38125600 ZNF genes & repeats Primary T cells from cord blood blood
25 chr10:38114400-38125800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr10:38114400-38130000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
27 chr10:38114600-38116200 Weak transcription Fetal Intestine Large intestine
28 chr10:38114600-38116200 Weak transcription Ovary ovary
29 chr10:38114600-38117400 Weak transcription NH-A brain
30 chr10:38114600-38120600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr10:38114800-38116600 Weak transcription Primary hematopoietic stem cells blood
32 chr10:38114800-38117800 Weak transcription Placenta Placenta
33 chr10:38114800-38120600 Weak transcription Fetal Stomach stomach
34 chr10:38115000-38116400 Weak transcription Brain Angular Gyrus brain
35 chr10:38115200-38118400 Weak transcription Stomach Mucosa stomach
36 chr10:38115400-38117000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr10:38115400-38118000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr10:38115600-38117400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr10:38115600-38129000 ZNF genes & repeats A549 lung
40 chr10:38115600-38138200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr10:38115800-38116600 ZNF genes & repeats Stomach Smooth Muscle stomach
42 chr10:38115800-38116800 ZNF genes & repeats Pancreas Pancrea
43 chr10:38115800-38117000 ZNF genes & repeats Fetal Muscle Leg muscle
44 chr10:38115800-38118600 Strong transcription Skeletal Muscle Male skeletal muscle
45 chr10:38115800-38119000 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr10:38115800-38122800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
47 chr10:38115800-38123000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
48 chr10:38115800-38123000 ZNF genes & repeats Aorta Aorta
49 chr10:38115800-38123600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
50 chr10:38115800-38132200 ZNF genes & repeats Fetal Brain Female brain

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