Variant report

Variant rs1208727
Chromosome Location chr10:38118179-38118180
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:38111200-38118400 Weak transcription HepG2 liver
2 chr10:38114000-38118800 Weak transcription HSMMtube muscle
3 chr10:38114000-38128800 ZNF genes & repeats Liver Liver
4 chr10:38114200-38119000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr10:38114400-38123600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
6 chr10:38114400-38125600 ZNF genes & repeats Primary T cells from cord blood blood
7 chr10:38114400-38125800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr10:38114400-38130000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
9 chr10:38114600-38120600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr10:38114800-38120600 Weak transcription Fetal Stomach stomach
11 chr10:38115200-38118400 Weak transcription Stomach Mucosa stomach
12 chr10:38115600-38129000 ZNF genes & repeats A549 lung
13 chr10:38115600-38138200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr10:38115800-38118600 Strong transcription Skeletal Muscle Male skeletal muscle
15 chr10:38115800-38119000 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr10:38115800-38122800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
17 chr10:38115800-38123000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
18 chr10:38115800-38123000 ZNF genes & repeats Aorta Aorta
19 chr10:38115800-38123600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
20 chr10:38115800-38132200 ZNF genes & repeats Fetal Brain Female brain
21 chr10:38116000-38118400 Strong transcription Skeletal Muscle Female skeletal muscle
22 chr10:38116000-38120000 Strong transcription Left Ventricle heart
23 chr10:38116000-38122800 ZNF genes & repeats Adipose Nuclei Adipose
24 chr10:38116000-38123000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr10:38116000-38128800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr10:38116200-38119000 Strong transcription Fetal Kidney kidney
27 chr10:38116200-38123600 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
28 chr10:38116200-38127600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
29 chr10:38116200-38137800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr10:38116400-38119800 Strong transcription Brain Angular Gyrus brain
31 chr10:38116400-38120000 Strong transcription Brain Anterior Caudate brain
32 chr10:38116400-38120600 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr10:38116400-38128400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
34 chr10:38116600-38118600 Weak transcription Fetal Thymus thymus
35 chr10:38116600-38119400 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr10:38116600-38119800 Strong transcription Brain Inferior Temporal Lobe brain
37 chr10:38116600-38121600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr10:38116600-38123800 ZNF genes & repeats Duodenum Mucosa Duodenum
39 chr10:38116600-38135800 ZNF genes & repeats Primary hematopoietic stem cells blood
40 chr10:38116800-38120600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr10:38116800-38122600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr10:38117000-38118800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr10:38117200-38118200 Strong transcription Colon Smooth Muscle Colon
44 chr10:38117200-38118600 Strong transcription Dnd41 blood
45 chr10:38117200-38118800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr10:38117200-38118800 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr10:38117200-38118800 Strong transcription Psoas Muscle Psoas
48 chr10:38117200-38123400 ZNF genes & repeats Fetal Brain Male brain
49 chr10:38117200-38127400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
50 chr10:38117200-38129600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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