Variant report

Variant rs2472165
Chromosome Location chr10:38347806-38347807
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:38326600-38349200 Weak transcription HepG2 liver
2 chr10:38334000-38350600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
3 chr10:38336200-38351600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr10:38338000-38348200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
5 chr10:38338200-38348800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr10:38340800-38348400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr10:38340800-38351200 ZNF genes & repeats Liver Liver
8 chr10:38340800-38351600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
9 chr10:38340800-38353400 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
10 chr10:38341200-38351200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
11 chr10:38341200-38353800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr10:38341400-38348200 ZNF genes & repeats Duodenum Mucosa Duodenum
13 chr10:38341600-38351200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
14 chr10:38341600-38351400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
15 chr10:38341600-38351600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr10:38342000-38348200 ZNF genes & repeats Primary B cells from cord blood blood
17 chr10:38342000-38348200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
18 chr10:38342000-38348400 ZNF genes & repeats Primary hematopoietic stem cells blood
19 chr10:38342000-38348800 ZNF genes & repeats Primary T cells from cord blood blood
20 chr10:38342000-38351200 Strong transcription Skeletal Muscle Male skeletal muscle
21 chr10:38342200-38348200 ZNF genes & repeats H1 Cell Line embryonic stem cell
22 chr10:38342200-38350400 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
23 chr10:38344200-38348200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr10:38344800-38349200 Weak transcription Pancreas Pancrea
25 chr10:38345200-38350600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr10:38345400-38355200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr10:38345600-38348200 Strong transcription Brain Germinal Matrix brain
28 chr10:38345600-38349200 Weak transcription Brain Substantia Nigra brain
29 chr10:38345600-38349200 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr10:38345600-38349200 Weak transcription Spleen Spleen
31 chr10:38345600-38350200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr10:38345600-38350400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr10:38345600-38353400 Strong transcription Rectal Mucosa Donor 29 rectum
34 chr10:38345600-38354400 Weak transcription Brain Cingulate Gyrus brain
35 chr10:38345800-38348000 ZNF genes & repeats Fetal Intestine Large intestine
36 chr10:38345800-38349200 Weak transcription Colon Smooth Muscle Colon
37 chr10:38345800-38353200 Strong transcription Dnd41 blood
38 chr10:38346000-38351400 Strong transcription Stomach Smooth Muscle stomach
39 chr10:38346000-38353200 Weak transcription Placenta Amnion Placenta Amnion
40 chr10:38346200-38348000 Strong transcription Primary T helper naive cells from peripheral blood blood
41 chr10:38346200-38348800 Weak transcription Brain Hippocampus Middle brain
42 chr10:38346200-38349200 Weak transcription Brain Angular Gyrus brain
43 chr10:38346200-38350600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr10:38346200-38351200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr10:38346200-38358200 Weak transcription Muscle Satellite Cultured Cells --
46 chr10:38346400-38349200 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr10:38346400-38349200 Weak transcription Brain Anterior Caudate brain
48 chr10:38346400-38349200 Weak transcription HSMM muscle
49 chr10:38346400-38349600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr10:38346400-38350000 Weak transcription Brain Inferior Temporal Lobe brain

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