Variant report

Variant	rs11606279
Chromosome Location	chr11:121054750-121054751
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10502248	1.00[EUR][1000 genomes]
rs12278183	1.00[EUR][1000 genomes]
rs17124838	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17124943	1.00[EUR][1000 genomes]
rs17125003	1.00[EUR][1000 genomes]
rs17125005	1.00[EUR][1000 genomes]
rs17125007	1.00[EUR][1000 genomes]
rs17125013	1.00[EUR][1000 genomes]
rs17125066	1.00[EUR][1000 genomes]
rs2077203	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56068090	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57169355	1.00[EUR][1000 genomes]
rs59174011	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59976776	1.00[EUR][1000 genomes]
rs626945	1.00[EUR][1000 genomes]
rs649404	1.00[EUR][1000 genomes]
rs667418	1.00[EUR][1000 genomes]
rs7103341	1.00[EUR][1000 genomes]
rs7109612	1.00[EUR][1000 genomes]
rs7112214	1.00[EUR][1000 genomes]
rs7120718	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7122846	1.00[EUR][1000 genomes]
rs73583180	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73583183	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73583186	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73583187	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73583191	1.00[EUR][1000 genomes]
rs73583193	1.00[EUR][1000 genomes]
rs73583199	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584905	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584909	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584914	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584917	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73589504	1.00[EUR][1000 genomes]
rs73589525	1.00[EUR][1000 genomes]
rs73592731	1.00[EUR][1000 genomes]
rs73592747	1.00[EUR][1000 genomes]
rs73592754	1.00[EUR][1000 genomes]
rs73592756	1.00[EUR][1000 genomes]
rs73592766	1.00[EUR][1000 genomes]
rs73599482	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73599484	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73599490	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73599492	1.00[EUR][1000 genomes]
rs73601425	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs763681	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7924615	1.00[EUR][1000 genomes]
rs7926577	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7932909	1.00[EUR][1000 genomes]
rs7942732	1.00[EUR][1000 genomes]
rs7946427	1.00[EUR][1000 genomes]
rs891435	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3452186	chr11:121053973-121057504	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121039600-121055200	Weak transcription	Ovary	ovary
2	chr11:121049200-121054800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr11:121051200-121056200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr11:121052800-121065600	Weak transcription	Gastric	stomach
5	chr11:121053400-121057600	Weak transcription	Aorta	Aorta
6	chr11:121053800-121065600	Weak transcription	Pancreas	Pancrea
7	chr11:121054400-121061800	Weak transcription	Stomach Smooth Muscle	stomach

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