Variant report

Variant	rs73583180
Chromosome Location	chr11:121020095-121020096
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:121015230..121016817-chr11:121018608..121021248,2	K562	blood:

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10502248	1.00[EUR][1000 genomes]
rs11606279	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12278183	1.00[EUR][1000 genomes]
rs17124838	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17124943	1.00[EUR][1000 genomes]
rs17125003	1.00[EUR][1000 genomes]
rs17125005	1.00[EUR][1000 genomes]
rs17125007	1.00[EUR][1000 genomes]
rs17125013	1.00[EUR][1000 genomes]
rs17125066	1.00[EUR][1000 genomes]
rs2077203	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56068090	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57169355	1.00[EUR][1000 genomes]
rs59174011	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59976776	1.00[EUR][1000 genomes]
rs626945	1.00[EUR][1000 genomes]
rs649404	1.00[EUR][1000 genomes]
rs667418	1.00[EUR][1000 genomes]
rs7103341	1.00[EUR][1000 genomes]
rs7109612	1.00[EUR][1000 genomes]
rs7112214	1.00[EUR][1000 genomes]
rs7120718	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7122846	1.00[EUR][1000 genomes]
rs73583183	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73583186	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73583187	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73583191	1.00[EUR][1000 genomes]
rs73583193	1.00[EUR][1000 genomes]
rs73583199	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584905	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584909	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584914	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584917	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73589504	1.00[EUR][1000 genomes]
rs73589525	1.00[EUR][1000 genomes]
rs73592731	1.00[EUR][1000 genomes]
rs73592747	1.00[EUR][1000 genomes]
rs73592754	1.00[EUR][1000 genomes]
rs73592756	1.00[EUR][1000 genomes]
rs73592766	1.00[EUR][1000 genomes]
rs73599482	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73599484	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73599490	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73599492	1.00[EUR][1000 genomes]
rs73601425	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs763681	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7924615	1.00[EUR][1000 genomes]
rs7926577	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7932909	1.00[EUR][1000 genomes]
rs7942732	1.00[EUR][1000 genomes]
rs7946427	1.00[EUR][1000 genomes]
rs891435	1.00[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:120994400-121042400	Weak transcription	Brain Hippocampus Middle	brain
2	chr11:120996800-121037800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr11:120999600-121041600	Weak transcription	Brain Anterior Caudate	brain
4	chr11:121000000-121025200	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr11:121001400-121028000	Weak transcription	Fetal Stomach	stomach
6	chr11:121005800-121023600	Weak transcription	Left Ventricle	heart
7	chr11:121006000-121024800	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr11:121006400-121035400	Weak transcription	Brain Angular Gyrus	brain
9	chr11:121006400-121040200	Weak transcription	Right Ventricle	heart
10	chr11:121006600-121034800	Weak transcription	HSMMtube	muscle
11	chr11:121007000-121028800	Weak transcription	Fetal Muscle Leg	muscle
12	chr11:121008000-121028600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr11:121008800-121023800	Weak transcription	Fetal Brain Female	brain
14	chr11:121008800-121025600	Weak transcription	Brain Germinal Matrix	brain
15	chr11:121008800-121032800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr11:121009000-121042800	Weak transcription	Pancreas	Pancrea
17	chr11:121011400-121040200	Weak transcription	Skeletal Muscle Male	skeletal muscle
18	chr11:121012800-121028400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr11:121017000-121025600	Weak transcription	Brain Cingulate Gyrus	brain
20	chr11:121017000-121031600	Weak transcription	Gastric	stomach
21	chr11:121017000-121042400	Weak transcription	Brain Substantia Nigra	brain
22	chr11:121017600-121020400	Weak transcription	Ovary	ovary
23	chr11:121018200-121031000	Weak transcription	Rectal Smooth Muscle	rectum
24	chr11:121019000-121028600	Weak transcription	Aorta	Aorta
25	chr11:121019800-121020600	Enhancers	Fetal Intestine Small	intestine
26	chr11:121020000-121020600	Enhancers	Fetal Intestine Large	intestine

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