Variant report

Variant	rs11632314
Chromosome Location	chr15:73986675-73986676
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:73975160..73977324-chr15:73984548..73987119,2	K562	blood:
2	chr15:73962715..73965084-chr15:73986509..73988658,2	MCF-7	breast:
3	chr15:73924881..73927560-chr15:73986387..73988157,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000103855	Chromatin interaction
ENSG00000156642	Chromatin interaction

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11072426	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11072435	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11633108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11634820	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12594091	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12595823	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16958010	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16958014	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs34696288	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55743544	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56079161	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56341782	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58035582	0.86[AFR][1000 genomes]
rs7168736	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8024103	0.94[ASN][1000 genomes]

No data

Chromatin state (count:102 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73978800-73989000	Weak transcription	Fetal Kidney	kidney
2	chr15:73978800-74000800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr15:73979400-73986800	Weak transcription	Aorta	Aorta
4	chr15:73979400-73989000	Weak transcription	Fetal Intestine Large	intestine
5	chr15:73979400-73996400	Weak transcription	A549	lung
6	chr15:73980200-73988400	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr15:73980600-73988400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr15:73980600-73988400	Weak transcription	Brain Cingulate Gyrus	brain
9	chr15:73981400-73988000	Weak transcription	Spleen	Spleen
10	chr15:73981600-73987000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr15:73981800-73995000	Weak transcription	Pancreas	Pancrea
12	chr15:73982600-73990000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr15:73984200-73988000	Weak transcription	Brain Substantia Nigra	brain
14	chr15:73984200-73988200	Weak transcription	HUVEC	blood vessel
15	chr15:73984200-73988800	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr15:73984400-73987600	Weak transcription	HUES48 Cell Line	embryonic stem cell
17	chr15:73984400-73987800	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr15:73984400-73988000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr15:73984400-73988000	Weak transcription	Brain Germinal Matrix	brain
20	chr15:73984400-73988600	Weak transcription	HUES64 Cell Line	embryonic stem cell
21	chr15:73984400-73989000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr15:73984600-73986800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr15:73984600-73986800	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr15:73984600-73987000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr15:73984600-73987400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
26	chr15:73984600-73987800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
27	chr15:73984600-73988200	Weak transcription	Colonic Mucosa	Colon
28	chr15:73984600-73988400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr15:73984600-73988400	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr15:73984600-73989000	Weak transcription	Hela-S3	cervix
31	chr15:73984600-73989200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr15:73984600-73992000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
33	chr15:73984600-73995400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr15:73985000-73986800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr15:73985400-73989800	Enhancers	Right Ventricle	heart
36	chr15:73985400-73990600	Enhancers	Left Ventricle	heart
37	chr15:73985400-73993600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr15:73985800-73986800	Enhancers	Brain Angular Gyrus	brain
39	chr15:73985800-73986800	Enhancers	HepG2	liver
40	chr15:73986000-73986800	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr15:73986000-73987000	Genic enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr15:73986000-73987000	Enhancers	Fetal Muscle Leg	muscle
43	chr15:73986000-73987200	Enhancers	Gastric	stomach
44	chr15:73986000-73987600	Enhancers	Lung	lung
45	chr15:73986000-73987600	Enhancers	Right Atrium	heart
46	chr15:73986000-73987800	Enhancers	Liver	Liver
47	chr15:73986000-73987800	Enhancers	Fetal Brain Male	brain
48	chr15:73986000-73987800	Enhancers	HSMMtube	muscle
49	chr15:73986000-73988200	Genic enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr15:73986000-73989200	Enhancers	Primary hematopoietic stem cells short term culture	blood

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