The 2.0 version of rSNPBase

Variant report

Variant rs11651062
Chromosome Location chr17:63173959-63173960
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:63141000-63175200 Weak transcription Brain Cingulate Gyrus brain
2 chr17:63153600-63175400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr17:63157000-63179800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr17:63160000-63180400 Weak transcription Brain Substantia Nigra brain
5 chr17:63167400-63175200 Weak transcription Brain Germinal Matrix brain
6 chr17:63167600-63175000 Weak transcription Brain Angular Gyrus brain
7 chr17:63167800-63175000 Weak transcription Fetal Brain Female brain
8 chr17:63169800-63190800 Weak transcription Gastric stomach
9 chr17:63170000-63175000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr17:63170000-63175200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr17:63170000-63177600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr17:63170000-63178400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr17:63170000-63180200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr17:63170200-63174200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr17:63170200-63174600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr17:63170200-63175000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr17:63170200-63175200 Weak transcription Fetal Stomach stomach
18 chr17:63170200-63175600 Enhancers GM12878-XiMat blood
19 chr17:63170400-63175200 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr17:63170600-63175200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr17:63170600-63175200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr17:63170600-63175200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr17:63170600-63177600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr17:63170800-63175000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr17:63170800-63175000 Weak transcription Brain Anterior Caudate brain
26 chr17:63170800-63175200 Weak transcription Thymus Thymus
27 chr17:63170800-63175600 Weak transcription Primary T cells from cord blood blood
28 chr17:63170800-63177400 Weak transcription Primary hematopoietic stem cells blood
29 chr17:63171000-63175600 Weak transcription Fetal Kidney kidney
30 chr17:63171200-63175200 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr17:63171400-63175000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr17:63171400-63175000 Weak transcription Fetal Brain Male brain
33 chr17:63171400-63175200 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr17:63171600-63175000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr17:63171600-63175800 Weak transcription Spleen Spleen
36 chr17:63172200-63176000 Weak transcription Rectal Smooth Muscle rectum
37 chr17:63172400-63174800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr17:63172600-63175000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr17:63172600-63175000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr17:63172800-63175000 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr17:63173000-63175400 Enhancers Dnd41 blood
42 chr17:63173000-63179800 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr17:63173200-63175000 Weak transcription Stomach Smooth Muscle stomach
44 chr17:63173400-63179800 Weak transcription Aorta Aorta
45 chr17:63173600-63176000 Enhancers HUVEC blood vessel
46 chr17:63173600-63180000 Enhancers Primary Natural Killer cells fromperipheralblood blood
47 chr17:63173800-63174000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
48 chr17:63173800-63174200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr17:63173800-63174400 Enhancers Fetal Thymus thymus
50 chr17:63173800-63174400 Enhancers NH-A brain

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Last update: Aug 31, 2015