Variant report

Variant rs11656665
Chromosome Location chr17:17724789-17724790
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17714000-17725800 Weak transcription Aorta Aorta
2 chr17:17715600-17726400 Weak transcription Fetal Kidney kidney
3 chr17:17716200-17726000 Weak transcription Placenta Amnion Placenta Amnion
4 chr17:17718200-17728600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
5 chr17:17720400-17726200 Enhancers Fetal Heart heart
6 chr17:17720600-17726400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
7 chr17:17721200-17725600 Genic enhancers Fetal Intestine Small intestine
8 chr17:17721600-17724800 Genic enhancers Lung lung
9 chr17:17721600-17725000 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr17:17721600-17725400 Genic enhancers Fetal Muscle Trunk muscle
11 chr17:17721600-17726000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
12 chr17:17721800-17724800 Genic enhancers Primary hematopoietic stem cells short term culture blood
13 chr17:17721800-17725400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr17:17722000-17725800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr17:17722200-17726400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr17:17722200-17726600 Transcr. at gene 5' and 3' Hela-S3 cervix
17 chr17:17722400-17726200 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr17:17722400-17726400 Enhancers Fetal Brain Male brain
19 chr17:17722600-17725400 Weak transcription HSMMtube muscle
20 chr17:17722600-17726400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr17:17722800-17725400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr17:17722800-17725400 Weak transcription Fetal Lung lung
23 chr17:17722800-17725800 Weak transcription Primary B cells from cord blood blood
24 chr17:17722800-17726000 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr17:17722800-17726200 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr17:17722800-17726200 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr17:17722800-17726600 Transcr. at gene 5' and 3' A549 lung
28 chr17:17722800-17726800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
29 chr17:17723000-17725400 Weak transcription Small Intestine intestine
30 chr17:17723000-17725600 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr17:17723200-17725200 Enhancers Primary T cells from cord blood blood
32 chr17:17723200-17725800 Enhancers Primary T helper cells fromperipheralblood blood
33 chr17:17723200-17726200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr17:17723200-17730000 Enhancers Stomach Mucosa stomach
35 chr17:17723400-17724800 Weak transcription Primary hematopoietic stem cells blood
36 chr17:17723400-17725600 Enhancers Colon Smooth Muscle Colon
37 chr17:17723400-17726000 Weak transcription HSMM muscle
38 chr17:17723400-17726200 Flanking Active TSS Brain Cingulate Gyrus brain
39 chr17:17723600-17725400 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr17:17723600-17725400 Weak transcription Muscle Satellite Cultured Cells --
41 chr17:17723600-17725600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr17:17723600-17725600 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr17:17723600-17725600 Weak transcription Primary B cells from peripheral blood blood
44 chr17:17723600-17725600 Enhancers Duodenum Smooth Muscle Duodenum
45 chr17:17723600-17726000 Enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr17:17723600-17726400 Enhancers Primary T helper cells PMA-I stimulated --
47 chr17:17723600-17727600 Active TSS Pancreatic Islets Pancreatic Islet
48 chr17:17723800-17724800 Weak transcription H1 Cell Line embryonic stem cell
49 chr17:17723800-17724800 Enhancers Colonic Mucosa Colon
50 chr17:17723800-17724800 Weak transcription Psoas Muscle Psoas

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