Variant report

Variant rs12952723
Chromosome Location chr17:17731651-17731652
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17727000-17732200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr17:17727600-17731800 Enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr17:17727600-17734400 Enhancers Placenta Placenta
4 chr17:17727600-17736400 Enhancers Liver Liver
5 chr17:17727800-17731800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
6 chr17:17727800-17732200 Enhancers Primary T cells fromperipheralblood blood
7 chr17:17727800-17732400 Enhancers Primary T helper cells fromperipheralblood blood
8 chr17:17728000-17732000 Enhancers Colonic Mucosa Colon
9 chr17:17728200-17731800 Enhancers Primary hematopoietic stem cells blood
10 chr17:17728400-17732600 Weak transcription Fetal Brain Male brain
11 chr17:17728600-17732800 Weak transcription Fetal Brain Female brain
12 chr17:17728600-17734200 Weak transcription Brain Angular Gyrus brain
13 chr17:17728600-17734200 Enhancers Skeletal Muscle Female skeletal muscle
14 chr17:17728600-17734600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr17:17728600-17734800 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr17:17728600-17737800 Weak transcription NH-A brain
17 chr17:17728600-17738400 Weak transcription H9 Cell Line embryonic stem cell
18 chr17:17728600-17738400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr17:17728600-17738600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr17:17728600-17738600 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr17:17728600-17738800 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr17:17728600-17738800 Weak transcription Fetal Kidney kidney
23 chr17:17728800-17733000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr17:17729000-17734000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr17:17729000-17734400 Weak transcription Brain Germinal Matrix brain
26 chr17:17729000-17738400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr17:17729200-17738400 Weak transcription Aorta Aorta
28 chr17:17729400-17732600 Weak transcription Brain Cingulate Gyrus brain
29 chr17:17729400-17733800 Weak transcription Right Atrium heart
30 chr17:17729400-17734000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr17:17729400-17734000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr17:17729400-17734400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr17:17729400-17734400 Weak transcription Placenta Amnion Placenta Amnion
34 chr17:17729400-17734800 Weak transcription NHDF-Ad bronchial
35 chr17:17729400-17738400 Weak transcription Small Intestine intestine
36 chr17:17729400-17738400 Weak transcription Osteobl bone
37 chr17:17729600-17732000 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
38 chr17:17729600-17732200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr17:17729600-17732800 Weak transcription Brain Anterior Caudate brain
40 chr17:17729600-17734200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr17:17729600-17734200 Strong transcription Fetal Stomach stomach
42 chr17:17729600-17734400 Weak transcription Fetal Lung lung
43 chr17:17729600-17737600 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr17:17729600-17738400 Weak transcription HSMM muscle
45 chr17:17729600-17738400 Weak transcription HSMMtube muscle
46 chr17:17729800-17731800 Weak transcription Fetal Heart heart
47 chr17:17729800-17732000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr17:17729800-17732200 Enhancers Primary T helper cells PMA-I stimulated --
49 chr17:17729800-17732200 Genic enhancers NHEK skin
50 chr17:17729800-17734800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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