The 2.0 version of rSNPBase

Variant report

Variant rs11678413
Chromosome Location chr2:114660286-114660287
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114648600-114667600 Weak transcription Lung lung
2 chr2:114649200-114661200 Weak transcription Fetal Muscle Trunk muscle
3 chr2:114649200-114673200 Weak transcription Placenta Placenta
4 chr2:114649600-114661000 Weak transcription Fetal Muscle Leg muscle
5 chr2:114650200-114661000 Weak transcription Right Ventricle heart
6 chr2:114652000-114667600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:114652000-114667600 Weak transcription Esophagus oesophagus
8 chr2:114652200-114700600 Weak transcription Fetal Brain Male brain
9 chr2:114652400-114660400 Weak transcription Fetal Kidney kidney
10 chr2:114652400-114686000 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:114653200-114662400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr2:114653400-114662000 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr2:114653400-114672600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr2:114653600-114734800 Weak transcription H9 Cell Line embryonic stem cell
15 chr2:114654000-114660400 Enhancers Primary B cells from peripheral blood blood
16 chr2:114654000-114670000 Enhancers Primary neutrophils fromperipheralblood blood
17 chr2:114654400-114667600 Weak transcription Thymus Thymus
18 chr2:114654600-114674600 Weak transcription Hela-S3 cervix
19 chr2:114654600-114675400 Weak transcription Fetal Stomach stomach
20 chr2:114654800-114663400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr2:114654800-114666800 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr2:114655400-114661000 Weak transcription H1 Cell Line embryonic stem cell
23 chr2:114655400-114663000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:114655600-114661800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr2:114655600-114665400 Enhancers Primary monocytes fromperipheralblood blood
26 chr2:114655600-114665800 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr2:114655600-114667600 Weak transcription HMEC breast
28 chr2:114655600-114667800 Weak transcription Fetal Intestine Small intestine
29 chr2:114655800-114661000 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr2:114655800-114661800 Weak transcription Fetal Brain Female brain
31 chr2:114655800-114662000 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr2:114655800-114665000 Weak transcription Ovary ovary
33 chr2:114655800-114672600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr2:114655800-114672600 Weak transcription NHEK skin
35 chr2:114656000-114661800 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr2:114656000-114662200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:114656600-114661800 Weak transcription Brain Anterior Caudate brain
38 chr2:114656600-114664600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:114656600-114668000 Weak transcription NHLF lung
40 chr2:114656800-114661000 Weak transcription Fetal Thymus thymus
41 chr2:114656800-114670800 Weak transcription Dnd41 blood
42 chr2:114657200-114661400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr2:114657200-114661600 Weak transcription HUVEC blood vessel
44 chr2:114657400-114660400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr2:114657400-114661000 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr2:114657400-114661200 Enhancers Sigmoid Colon Sigmoid Colon
47 chr2:114657400-114661400 Weak transcription Brain Germinal Matrix brain
48 chr2:114657400-114661800 Weak transcription NHDF-Ad bronchial
49 chr2:114657400-114662000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr2:114657600-114661000 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015