The 2.0 version of rSNPBase

Variant report

Variant rs12996997
Chromosome Location chr2:114664429-114664430
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114648600-114667600 Weak transcription Lung lung
2 chr2:114649200-114673200 Weak transcription Placenta Placenta
3 chr2:114652000-114667600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr2:114652000-114667600 Weak transcription Esophagus oesophagus
5 chr2:114652200-114700600 Weak transcription Fetal Brain Male brain
6 chr2:114652400-114686000 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:114653400-114672600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr2:114653600-114734800 Weak transcription H9 Cell Line embryonic stem cell
9 chr2:114654000-114670000 Enhancers Primary neutrophils fromperipheralblood blood
10 chr2:114654400-114667600 Weak transcription Thymus Thymus
11 chr2:114654600-114674600 Weak transcription Hela-S3 cervix
12 chr2:114654600-114675400 Weak transcription Fetal Stomach stomach
13 chr2:114654800-114666800 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr2:114655600-114665400 Enhancers Primary monocytes fromperipheralblood blood
15 chr2:114655600-114665800 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr2:114655600-114667600 Weak transcription HMEC breast
17 chr2:114655600-114667800 Weak transcription Fetal Intestine Small intestine
18 chr2:114655800-114665000 Weak transcription Ovary ovary
19 chr2:114655800-114672600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr2:114655800-114672600 Weak transcription NHEK skin
21 chr2:114656600-114664600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:114656600-114668000 Weak transcription NHLF lung
23 chr2:114656800-114670800 Weak transcription Dnd41 blood
24 chr2:114658000-114665000 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr2:114658000-114667800 Weak transcription Rectal Smooth Muscle rectum
26 chr2:114658000-114675400 Weak transcription Aorta Aorta
27 chr2:114658000-114689400 Weak transcription Fetal Heart heart
28 chr2:114658200-114665000 Weak transcription Psoas Muscle Psoas
29 chr2:114658200-114667600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr2:114658200-114668000 Weak transcription Muscle Satellite Cultured Cells --
31 chr2:114658400-114671200 Weak transcription Osteobl bone
32 chr2:114658400-114674200 Weak transcription Fetal Intestine Large intestine
33 chr2:114658600-114665600 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr2:114658800-114667600 Weak transcription Gastric stomach
35 chr2:114659000-114664800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr2:114659000-114667600 Weak transcription Pancreas Pancrea
37 chr2:114659000-114671200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr2:114659800-114667600 Weak transcription Brain Hippocampus Middle brain
39 chr2:114660000-114667400 Weak transcription Brain Substantia Nigra brain
40 chr2:114660200-114671000 Weak transcription NH-A brain
41 chr2:114661000-114667800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:114661000-114671000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:114661200-114664800 Weak transcription Liver Liver
44 chr2:114661200-114666800 Weak transcription Duodenum Mucosa Duodenum
45 chr2:114661200-114667400 Weak transcription Stomach Mucosa stomach
46 chr2:114661200-114667600 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr2:114661200-114667800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr2:114661200-114683800 Weak transcription Colonic Mucosa Colon
49 chr2:114661400-114667400 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr2:114661600-114666800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015